TBXAS1

General Information

Gene Name : TBXAS1
Gene ID : ENSG00000059377.16
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: TBXAS1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	TBXAS1	ENSG00000059377.16	22.35	15.49	18.92	ENCSR000AEF
HepG2	TBXAS1	ENSG00000059377.16	2.26	1.96	2.11	ENCSR985KAT
K562	TBXAS1	ENSG00000059377.16	1.61	1.33	1.47	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for TBXAS1 is not avaliable on ENCORE database.

Proteins bound to RNA

TBXAS1 RNA is bound by 3 proteins.

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eCLIP assay for TBXAS1 is not avaliable on ENCORE database.

3 proteins are bound to TBXAS1 RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr7	139477998	139478082	+	5'-UTR,intron-Distal,intron-Proximal	4.68036	4.68055	HepG2	CSTF2T
chr7	139482576	139482711	+	intron-Distal,intron-Proximal	4.21482	4.27936	HepG2	PTBP1
chr7	139478161	139478226	+	5'-UTR,intron-Distal	3.37899	4.21158	HepG2	CSTF2T
chr7	139478131	139478211	+	5'-UTR,intron-Distal	3.53101	4.12907	HepG2	FASTKD2
chr7	139477889	139477937	+	intron-Distal	3.16367	3.48399	HepG2	CSTF2T
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 5 of 5 entries

eCLIP assay for TBXAS1 is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for TBXAS1 is not available on ENCORE database.
37 RBPs can affect the levels of TBXAS1.

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The Knockdown/knockout RNA-Seq assay for TBXAS1 is not available on ENCORE database.

37 RBPs can affect the gene expression of TBXAS1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
TBXAS1	ENSG00000059377.11	210.74140	64.81460	1.70100	16.72470	15.52080	HepG2	PUM1
TBXAS1	ENSG00000059377.11	189.87250	50.22360	1.91850	15.08210	14.00220	HepG2	PTBP1
TBXAS1	ENSG00000059377.11	182.62860	35.45470	2.36480	13.99090	12.32410	HepG2	CNOT7
TBXAS1	ENSG00000059377.11	225.25070	60.77120	1.89000	12.24130	11.20130	HepG2	AKAP1
TBXAS1	ENSG00000059377.11	138.50770	59.99620	1.20690	6.56620	5.65580	HepG2	CELF1
TBXAS1	ENSG00000059377.11	150.75430	51.72490	1.54320	6.59580	5.56590	HepG2	EIF4B
TBXAS1	ENSG00000059377.11	124.24260	37.35620	1.73360	6.71180	5.48170	HepG2	PARN
TBXAS1	ENSG00000059377.11	110.43280	24.39190	2.17860	6.32550	5.46250	HepG2	PUS1
TBXAS1	ENSG00000059377.11	141.06100	45.73300	1.62490	6.24080	5.20500	HepG2	RAVER1
TBXAS1	ENSG00000059377.11	109.27140	32.17410	1.76380	6.11900	5.20150	HepG2	U2AF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 39 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

TBXAS1

General Information

Functions

Localization

Domains (AlphaFold: TBXAS1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for TBXAS1 is not avaliable on ENCORE database.

3 proteins are bound to TBXAS1 RNA:

eCLIP assay for TBXAS1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for TBXAS1 is not available on ENCORE database.

37 RBPs can affect the gene expression of TBXAS1 :

The Knockdown/knockout RNA-Seq assay for TBXAS1 is not available on ENCORE database.

No RBPs affect the alternative splcing events of TBXAS1 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for TBXAS1 is not avaliable on ENCORE database.