NUDT1

General Information

Gene Name       : NUDT1
Gene ID             : ENSG00000106268.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: NUDT1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878NUDT1ENSG00000106268.154.8424.9514.89ENCSR000AEF
HepG2NUDT1ENSG00000106268.1525.1812.3418.76ENCSR985KAT
K562NUDT1ENSG00000106268.1529.6719.8924.78ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for NUDT1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • NUDT1 RNA is bound by 5 proteins.  







eCLIP assay for NUDT1 is not avaliable on ENCORE database.





5 proteins are bound to NUDT1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr722905602290736+3'-UTR,CDS4.048319.96973K562PABPC4
chr722820132282140+5'-UTR,intron-Distal,intron-Proximal3.326128.17562K562AQR
chr722842422284362+CDS,intron-Proximal4.545009.68900K562DDX3X
chr722843302284364+CDS,intron-Proximal3.881553.01428K562UCHL5
chr722842902284362+CDS,intron-Proximal4.659384.23238K562FTO
chr722894912289532+CDS,intron-Proximal3.950303.36385K562UCHL5
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for NUDT1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for NUDT1 is not available on ENCORE database.

  • 52 RBPs can affect the levels of NUDT1.  








The Knockdown/knockout RNA-Seq assay for NUDT1 is not available on ENCORE database.





52 RBPs can affect the gene expression of NUDT1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
NUDT1ENSG00000106268.1131.5851063.28660-1.002702.298801.38840HepG2ADAR
NUDT1ENSG00000106268.1181.92910183.60420-1.164207.277806.25100HepG2AUH
NUDT1ENSG00000106268.1140.9781097.84130-1.255604.039802.97270HepG2BCLAF1
NUDT1ENSG00000106268.1126.3234066.45940-1.336103.316902.66840HepG2BOP1
NUDT1ENSG00000106268.1124.5887066.61110-1.437802.740101.97190HepG2CALR
NUDT1ENSG00000106268.1153.0893097.96560-0.883903.059202.36720HepG2CKAP4
NUDT1ENSG00000106268.1134.7553074.05400-1.091302.926901.98460HepG2DDX24
NUDT1ENSG00000106268.1124.8370069.28660-1.480103.487102.39130HepG2DDX59
NUDT1ENSG00000106268.1134.9439069.69030-0.995902.372001.35160HepG2AGO1
NUDT1ENSG00000106268.1190.81300146.39010-0.688802.401601.61360HepG2EIF4G1
NUDT1ENSG00000106268.1179.26390140.22960-0.823102.962502.12130HepG2EIF4G2
NUDT1ENSG00000106268.1167.52120210.83260-1.6427010.786109.72490HepG2ETF1
NUDT1ENSG00000106268.11207.6033063.477201.7094011.5474010.23210HepG2FXR1
NUDT1ENSG00000106268.1135.6897069.17030-0.954601.965801.42020HepG2GPKOW
NUDT1ENSG00000106268.1129.6888066.01010-1.152802.486901.88560HepG2HNRNPLL
NUDT1ENSG00000106268.11108.2986063.499300.770102.170401.58720HepG2MAGOH
NUDT1ENSG00000106268.1131.1175085.38980-1.456304.509503.50490HepG2PRPF8
NUDT1ENSG00000106268.1189.74450140.44670-0.646102.095001.56610HepG2PUF60
NUDT1ENSG00000106268.1191.70770176.21070-0.942204.937604.29560HepG2RBM22
NUDT1ENSG00000106268.11130.1670078.532100.728902.406501.89610HepG2NELFE
NUDT1ENSG00000106268.11122.8468073.143700.748002.513401.92270HepG2RECQL
NUDT1ENSG00000106268.1128.97700115.00250-1.988709.453008.31290HepG2RPLP0
NUDT1ENSG00000106268.1125.7138063.68290-1.308402.134501.30400HepG2RPS10
NUDT1ENSG00000106268.1120.6131068.74120-1.737605.420904.59310HepG2RPS19
NUDT1ENSG00000106268.1126.6950084.46570-1.661805.189604.14590HepG2RRP9
NUDT1ENSG00000106268.1127.4755065.33980-1.249802.906902.18330HepG2SF3B1
NUDT1ENSG00000106268.1127.3727072.70090-1.409203.199702.35750HepG2SNRNP70
NUDT1ENSG00000106268.1155.66210199.01230-1.8381012.5673011.70460HepG2SRFBP1
NUDT1ENSG00000106268.11120.8041076.683600.655601.961201.54390HepG2SRSF1
NUDT1ENSG00000106268.1153.15770104.88880-0.980503.575002.79820HepG2SRSF7
NUDT1ENSG00000106268.1180.61350172.77010-1.099806.365905.64630HepG2SSB
NUDT1ENSG00000106268.1129.31580110.21780-1.910607.806006.76470HepG2SUPV3L1
NUDT1ENSG00000106268.1119.5080064.32640-1.721304.463903.57030HepG2TARDBP
NUDT1ENSG00000106268.1130.0831073.87060-1.296003.627602.50510HepG2TFIP11
NUDT1ENSG00000106268.1130.7437069.06770-1.167703.176002.64600HepG2TIAL1
NUDT1ENSG00000106268.1140.2417072.15190-0.842302.219901.71490HepG2ZNF622
NUDT1ENSG00000106268.11222.11670137.545200.691303.409902.46090K562FIP1L1
NUDT1ENSG00000106268.1189.13310144.70640-0.699102.325301.30300K562FKBP4
NUDT1ENSG00000106268.118.3513072.89960-3.1258010.971909.37590K562G3BP2
NUDT1ENSG00000106268.11222.72430113.146200.977005.334503.99140K562HNRNPM
NUDT1ENSG00000106268.11258.75990339.56190-0.392102.131701.34900K562HNRNPU
NUDT1ENSG00000106268.11305.71230186.463500.713204.239703.26040K562HSPD1
NUDT1ENSG00000106268.11254.29150170.618800.575602.327801.40980K562IGF2BP2
NUDT1ENSG00000106268.1140.7998081.15920-0.992202.298401.45600K562KRR1
NUDT1ENSG00000106268.11252.41850179.238700.493802.343501.56650K562MAGOH
NUDT1ENSG00000106268.11275.74530156.160200.820205.287804.09390K562PPIG
NUDT1ENSG00000106268.11268.02950174.147200.622003.633802.88440K562PTBP1
NUDT1ENSG00000106268.1147.3238090.39190-0.933602.339501.45260K562SF3B1
NUDT1ENSG00000106268.11234.49960161.263100.540102.479701.49210K562SRSF5
NUDT1ENSG00000106268.1127.7373071.55970-1.367303.407401.71420K562TAF15
NUDT1ENSG00000106268.11297.92680172.772500.786003.574102.76620K562TARDBP
NUDT1ENSG00000106268.11255.50840166.663400.616303.188102.30050K562TIA1
NUDT1ENSG00000106268.11269.38380163.589200.719504.060202.69630K562TRA2A
NUDT1ENSG00000106268.11198.54150269.46580-0.440702.177201.53450K562UPF1
NUDT1ENSG00000106268.11291.88830424.91050-0.541703.183602.25060K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for NUDT1 is not available on ENCORE database.





1 RBPs can affect the splicing of NUDT1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
MXENUDT1ENSG00000106268.11chr7+22841972284361228949122896372281856228189122904632290780-0.182000.000150.034042includedK562ZC3H8

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for NUDT1 is not avaliable on ENCORE database.