KRT222

General Information

Gene Name : KRT222
Gene ID : ENSG00000213424.8
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: KRT222)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	KRT222	ENSG00000213424.8	0.28	0.78	0.53	ENCSR000AEF
HepG2	KRT222	ENSG00000213424.8	0.00	0.00	0.00	ENCSR985KAT
K562	KRT222	ENSG00000213424.8	0.08	0.02	0.05	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for KRT222 is not avaliable on ENCORE database.

Proteins bound to RNA

KRT222 RNA is bound by 18 proteins.

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eCLIP assay for KRT222 is not avaliable on ENCORE database.

18 proteins are bound to KRT222 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr17	38785015	38785240	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.16813	42.42368	K562	UCHL5
chr17	38785036	38785207	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.80532	31.55711	K562	ZNF622
chr17	38785015	38785196	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.01475	24.90096	HepG2	BCLAF1
chr17	38792212	38792355	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.46204	22.36757	K562	UCHL5
chr17	38794586	38794711	-	intron-Distal	5.69288	22.20475	HepG2	PTBP1
chr17	38787077	38787170	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.54873	21.08522	K562	UCHL5
chr17	38794575	38794682	-	intron-Distal	5.56538	18.65645	K562	PTBP1
chr17	38785042	38785215	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.43103	18.35227	HepG2	GRWD1
chr17	38788473	38788622	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.99685	17.03155	K562	UCHL5
chr17	38785038	38785118	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.34164	15.57094	K562	GRWD1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 54 entries

eCLIP assay for KRT222 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for KRT222 is not available on ENCORE database.
3 RBPs can affect the levels of KRT222.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for KRT222 is not available on ENCORE database.

3 RBPs can affect the gene expression of KRT222 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
KRT222	ENSG00000264058.1	20.88120	0.93590	4.47960	5.27870	4.61480	HepG2	SSB
KRT222	ENSG00000264058.1	0.39970	9.78960	-4.61420	2.36490	1.39820	HepG2	AKAP8
KRT222	ENSG00000264058.1	9.44490	1.07780	3.13140	1.75660	1.32950	HepG2	SRFBP1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 3 of 3 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for KRT222 is not available on ENCORE database.

5 RBPs can affect the splicing of KRT222 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	KRT222	ENSG00000264058.1	chr17	-	38786459	38786538			38785048	38785245	38786965	38787176	0.07000	0.00000	0.00001	included	K562	SRSF1
SE	KRT222	ENSG00000264058.1	chr17	-	38786459	38786538			38785048	38785245	38786965	38787176	0.05300	0.00000	0.00059	included	K562	XRCC6
A3SS	KRT222	ENSG00000264058.1	chr17	-	38785048	38785292			38785048	38785245	38786965	38787213	0.06600	0.00000	0.00000	longer	K562	AQR
A3SS	KRT222	ENSG00000264058.1	chr17	-	38787843	38788058			38787843	38787945	38788446	38788619	0.15900	0.00000	0.00000	longer	K562	AQR
A3SS	KRT222	ENSG00000264058.1	chr17	-	38788446	38788638			38788446	38788619	38792182	38792412	0.07100	0.00000	0.00000	longer	K562	AQR
MXE	KRT222	ENSG00000264058.1	chr17	-	38785688	38785820	38786459	38786538	38785048	38785245	38786965	38787176	-0.48700	0.00000	0.00005	2included	K562	SF3B4
SE	KRT222	ENSG00000264058.1	chr17	-	38786459	38786538			38785048	38785245	38786965	38787176	0.05400	0.00005	0.00715	included	K562	SUPV3L1
MXE	KRT222	ENSG00000264058.1	chr17	-	38785688	38785820	38786459	38786538	38785048	38785245	38786965	38787176	-0.12900	0.01058	0.06623	2included	K562	AQR

Showing 1 to 8 of 8 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

KRT222

General Information

Functions

Localization

Domains (AlphaFold: KRT222)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for KRT222 is not avaliable on ENCORE database.

18 proteins are bound to KRT222 RNA:

eCLIP assay for KRT222 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for KRT222 is not available on ENCORE database.

3 RBPs can affect the gene expression of KRT222 :

The Knockdown/knockout RNA-Seq assay for KRT222 is not available on ENCORE database.

5 RBPs can affect the splicing of KRT222 :

The Knockdown/knockout RNA-Seq assay for KRT222 is not avaliable on ENCORE database.