GPC2

General Information

Gene Name : GPC2
Gene ID : ENSG00000213420.7
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: GPC2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	GPC2	ENSG00000213420.7	0.15	0.67	0.41	ENCSR000AEF
HepG2	GPC2	ENSG00000213420.7	0.89	0.43	0.66	ENCSR985KAT
K562	GPC2	ENSG00000213420.7	1.24	0.90	1.07	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for GPC2 is not avaliable on ENCORE database.

Proteins bound to RNA

GPC2 RNA is bound by 1 proteins.

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eCLIP assay for GPC2 is not avaliable on ENCORE database.

1 proteins are bound to GPC2 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr7	99769465	99769532	-	CDS,intron-Distal	3.97044	3.20743	HepG2	PPIG
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 1 of 1 entries

eCLIP assay for GPC2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for GPC2 is not available on ENCORE database.
38 RBPs can affect the levels of GPC2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for GPC2 is not available on ENCORE database.

38 RBPs can affect the gene expression of GPC2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
GPC2	ENSG00000213420.3	123.07160	22.43400	2.45560	14.21400	13.16300	HepG2	PTBP1
GPC2	ENSG00000213420.3	191.15110	54.63240	1.80680	13.14780	12.18570	HepG2	RBM22
GPC2	ENSG00000213420.3	105.61180	19.01180	2.47370	9.54250	8.30380	HepG2	EIF4B
GPC2	ENSG00000213420.3	108.85160	40.23740	1.43570	5.21380	3.91920	K562	PSIP1
GPC2	ENSG00000213420.3	70.37480	25.52740	1.46290	4.60950	3.81450	HepG2	SMN1
GPC2	ENSG00000213420.3	101.02820	33.40070	1.59670	4.77760	3.79290	HepG2	DDX55
GPC2	ENSG00000213420.3	58.06520	18.27570	1.66760	4.19440	3.38400	HepG2	G3BP1
GPC2	ENSG00000213420.3	70.51160	24.96950	1.49760	3.96650	3.34050	HepG2	NELFE
GPC2	ENSG00000213420.3	58.91980	18.57670	1.66520	3.92530	3.13470	HepG2	IGF2BP2
GPC2	ENSG00000213420.3	64.50770	23.25090	1.47210	3.73990	3.03800	HepG2	RECQL
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 39 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for GPC2 is not available on ENCORE database.

3 RBPs can affect the splicing of GPC2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	GPC2	ENSG00000213420.3	chr7	-	99773194	99773517	99772307	99772388	99773829	99773988	0.84100	0.00049	0.09466	included	K562	SERBP1
SE	GPC2	ENSG00000213420.3	chr7	-	99773194	99773517	99772307	99772388	99773829	99773988	0.34100	0.00151	0.03838	included	K562	AGGF1
SE	GPC2	ENSG00000213420.3	chr7	-	99773194	99773517	99772307	99772388	99773829	99773988	0.36800	0.00160	0.04532	included	K562	AKAP8L

Showing 1 to 3 of 3 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

GPC2

General Information

Functions

Localization

Domains (AlphaFold: GPC2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for GPC2 is not avaliable on ENCORE database.

1 proteins are bound to GPC2 RNA:

eCLIP assay for GPC2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for GPC2 is not available on ENCORE database.

38 RBPs can affect the gene expression of GPC2 :

The Knockdown/knockout RNA-Seq assay for GPC2 is not available on ENCORE database.

3 RBPs can affect the splicing of GPC2 :

The Knockdown/knockout RNA-Seq assay for GPC2 is not avaliable on ENCORE database.