GFAP

General Information

Gene Name : GFAP
Gene ID : ENSG00000131095.12
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: GFAP)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	GFAP	ENSG00000131095.12	0.00	0.00	0.00	ENCSR000AEF
HepG2	GFAP	ENSG00000131095.12	0.04	0.12	0.08	ENCSR985KAT
K562	GFAP	ENSG00000131095.12	0.69	0.39	0.54	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for GFAP is not avaliable on ENCORE database.

Proteins bound to RNA

GFAP RNA is bound by 1 proteins.

CanvasJS.com

eCLIP assay for GFAP is not avaliable on ENCORE database.

1 proteins are bound to GFAP RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr17	42993885	42993891	-	intron-Distal	11.08681	92.32062	K562	UTP3
chr17	42993901	42993908	-	intron-Distal	11.08681	92.32062	K562	UTP3
chr17	42993891	42993901	-	intron-Distal	11.08681	92.32062	K562	UTP3
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 3 of 3 entries

eCLIP assay for GFAP is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for GFAP is not available on ENCORE database.
11 RBPs can affect the levels of GFAP.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for GFAP is not available on ENCORE database.

11 RBPs can affect the gene expression of GFAP :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
GFAP	ENSG00000131095.7	100.37810	33.01920	1.60400	6.47410	4.76140	K562	MSI2
GFAP	ENSG00000131095.7	18.17350	0.99150	4.19600	3.86220	3.16850	HepG2	EIF2S1
GFAP	ENSG00000131095.7	89.69560	38.05970	1.23670	4.09840	2.90120	K562	CELF1
GFAP	ENSG00000131095.7	70.78490	28.54750	1.31000	3.95110	2.88760	K562	ZC3H8
GFAP	ENSG00000131095.7	74.82120	28.75220	1.37970	4.01810	2.48500	K562	TROVE2
GFAP	ENSG00000131095.7	46.97570	15.57900	1.59220	3.15910	2.32030	K562	CPSF6
GFAP	ENSG00000131095.7	46.56180	15.84180	1.55530	2.97170	1.90880	K562	UCHL5
GFAP	ENSG00000131095.7	48.40990	20.20660	1.26040	2.71340	1.46170	K562	EXOSC5
GFAP	ENSG00000131095.7	4.87500	19.77440	-2.02020	2.12200	1.40150	K562	SYNCRIP
GFAP	ENSG00000131095.7	46.02410	18.24320	1.33490	2.03030	1.33140	K562	PPIG
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 11 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

GFAP

General Information

Functions

Localization

Domains (AlphaFold: GFAP)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for GFAP is not avaliable on ENCORE database.

1 proteins are bound to GFAP RNA:

eCLIP assay for GFAP is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for GFAP is not available on ENCORE database.

11 RBPs can affect the gene expression of GFAP :

The Knockdown/knockout RNA-Seq assay for GFAP is not available on ENCORE database.

No RBPs affect the alternative splcing events of GFAP on ENCORE database.

The Knockdown/knockout RNA-Seq assay for GFAP is not avaliable on ENCORE database.