AP000320.7

General Information

Gene Name : AP000320.7
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: AP000320.7)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for AP000320.7 is not avaliable on ENCORE database.

Proteins bound to RNA

AP000320.7 RNA is bound by 40 proteins.

CanvasJS.com

eCLIP assay for AP000320.7 is not avaliable on ENCORE database.

40 proteins are bound to AP000320.7 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr21	35458828	35458934	+	intron-Distal	5.85022	40.34010	K562	EXOSC5
chr21	35468366	35468707	+	CDS,intron-Distal	5.12229	39.11628	K562	SND1
chr21	35446226	35446344	+	intron-Distal	4.58438	38.90118	K562	GEMIN5
chr21	35459984	35460129	+	intron-Distal	5.28761	29.03621	K562	HNRNPM
chr21	35446449	35446558	+	intron-Distal	4.17056	26.35604	K562	GEMIN5
chr21	35478240	35478349	+	3'-UTR,intron-Distal	3.97375	26.30329	K562	KHSRP
chr21	35459873	35460063	+	intron-Distal	4.51300	24.90420	K562	EXOSC5
chr21	35471997	35472085	+	3'-UTR,intron-Distal	3.04204	21.75476	K562	PUM2
chr21	35470999	35471050	+	3'-UTR,intron-Distal	4.04415	20.91403	K562	PUM2
chr21	35478501	35478551	+	3'-UTR,intron-Distal	4.62036	20.31333	K562	KHSRP
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 161 entries

eCLIP assay for AP000320.7 is not avaliable on ENCORE database.

Summary
AS Affected by

Diffrential Expression

The Knockdown/knockout assay for AP000320.7 is not available on ENCORE database.
No RBPs affect the gene expression of AP000320.7 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for AP000320.7 is not available on ENCORE database.

No RBPs affect the gene expression of AP000320.7 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for AP000320.7 is not available on ENCORE database.

6 RBPs can affect the splicing of AP000320.7 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	AP000320.7	ENSG00000272657.1	chr21	+	35475133	35475207	35445891	35446045	35497640	35497780	0.06400	0.00001	0.00467	included	K562	DROSHA
SE	AP000320.7	ENSG00000272657.1	chr21	+	35475133	35475207	35445891	35446045	35497640	35497780	0.09500	0.00001	0.00077	included	K562	TARDBP
SE	AP000320.7	ENSG00000272657.1	chr21	+	35475133	35475211	35445891	35446045	35497640	35497780	0.05600	0.00006	0.00384	included	K562	FXR1
SE	AP000320.7	ENSG00000272657.1	chr21	+	35475133	35475207	35445891	35446045	35497640	35497780	0.07100	0.00013	0.00817	included	K562	PTBP1
SE	AP000320.7	ENSG00000272657.1	chr21	+	35475133	35475211	35445891	35446045	35497640	35497780	0.05300	0.00022	0.02335	included	K562	HNRNPUL1
SE	AP000320.7	ENSG00000272657.1	chr21	+	35475133	35475207	35445891	35446045	35497640	35497780	0.07000	0.00032	0.00836	included	K562	SRSF1

Showing 1 to 6 of 6 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

AP000320.7

General Information

Functions

Localization

Domains (AlphaFold: AP000320.7)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for AP000320.7 is not avaliable on ENCORE database.

40 proteins are bound to AP000320.7 RNA:

eCLIP assay for AP000320.7 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for AP000320.7 is not available on ENCORE database.

No RBPs affect the gene expression of AP000320.7 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for AP000320.7 is not available on ENCORE database.

6 RBPs can affect the splicing of AP000320.7 :

The Knockdown/knockout RNA-Seq assay for AP000320.7 is not avaliable on ENCORE database.