ENCORE RBNS:ZFP36L2

ZFP36L2 RNA Bind-n-Seq

Experiment Information (Status: Released)


RBP	ZFP36L2
gene_aliases	TIS11D
Status	Released
Status_date	2020-12-07
Project	ENCODE4
Note
ID	12

Motif Logo

Sample Information

Sample_Name	Sample_Type	Read_size_range	rbns_protein_concentration	FILE_ID
ZFP36L2-1300	RBNS	20-20	1300	TIS11D_0nM_1300.fastq.gz
ZFP36L2-5	RBNS	20-20	5	TIS11D_0nM_5.fastq.gz
ZFP36L2-80	RBNS	20-20	80	TIS11D_0nM_80.fastq.gz
ZFP36L2-input	CN	20-20	0	TIS11D_0nM_input.fastq.gz

Data Submission Information

ENCODE_alias	ENCODE_accession	object_type	assay_type	Sample_ID	SAMPLENAMEID	Selected	Status	Status_Date	Project	protocol_folder	protocol_file_name	ID
chris-burge:ZFP36L2	ENCSR249GVR	experiment	RNA Bind-n-Seq	ZFP36L2	DDX51-BGHcLV12-29	Yes	Released	2020-11-23	ENCODE4			1728
chris-burge:lib-ZFP36L2-1300	ENCLB271RPW	library	RNA Bind-n-Seq	ZFP36L2	DDX51-BGHcLV12-29	Yes	Released	2020-11-23	ENCODE4			1770
chris-burge:lib-ZFP36L2-5	ENCLB303CGT	library	RNA Bind-n-Seq	ZFP36L2	DDX51-BGHcLV12-30	Yes	Released	2020-11-23	ENCODE4			1771
chris-burge:lib-ZFP36L2-80	ENCLB183EEW	library	RNA Bind-n-Seq	ZFP36L2	MAK16-BGHcLV12-43	Yes	Released	2020-11-23	ENCODE4			1772
chris-burge:TIS11D_0nM_1300.fastq.gz	ENCFF818NQL	file_fastq	RNA Bind-n-Seq	ZFP36L2	DDX51-BGHcLV12-29	Yes	Released	2020-11-23	ENCODE4			1816
chris-burge:TIS11D_0nM_5.fastq.gz	ENCFF726RAA	file_fastq	RNA Bind-n-Seq	ZFP36L2	DDX51-BGHcLV12-30	Yes	Released	2020-11-23	ENCODE4			1817
chris-burge:TIS11D_0nM_80.fastq.gz	ENCFF712YGA	file_fastq	RNA Bind-n-Seq	ZFP36L2	MAK16-BGHcLV12-43	Yes	Released	2020-11-23	ENCODE4			1818
chris-burge:TIS11D_0nM_6mer_logo0.PWM.txt	ENCFF245MDF	file_pwm	RNA Bind-n-Seq	ZFP36L2	DDX51-BGHcLV12-29	Yes	Released	2020-11-23	ENCODE4			1885
chris-burge:TIS11D_0nM_6mer_logo1.PWM.txt	ENCFF827ILK	file_pwm	RNA Bind-n-Seq	ZFP36L2	DDX51-BGHcLV12-29	Yes	Released	2020-11-23	ENCODE4			1886
chris-burge:TIS11D_0nM_enrichment_R.4mers.txt	ENCFF510XIS	file_enrichment	RNA Bind-n-Seq	ZFP36L2	DDX51-BGHcLV12-29	Yes	Released	2020-11-23	ENCODE4			1887
chris-burge:TIS11D_0nM_enrichment_R.5mers.txt	ENCFF694JSN	file_enrichment	RNA Bind-n-Seq	ZFP36L2	DDX51-BGHcLV12-29	Yes	Released	2020-11-23	ENCODE4			1888
chris-burge:TIS11D_0nM_enrichment_R.6mers.txt	ENCFF511LJA	file_enrichment	RNA Bind-n-Seq	ZFP36L2	DDX51-BGHcLV12-29	Yes	Released	2020-11-23	ENCODE4			1889
chris-burge:TIS11D_0nM_enrichment_R.7mers.txt	ENCFF472AJZ	file_enrichment	RNA Bind-n-Seq	ZFP36L2	DDX51-BGHcLV12-29	Yes	Released	2020-11-23	ENCODE4			1890

File Information

file_name	file_format	output_type	assay_type	lab	derived_from	controlled_by	Project	Note
TIS11D_0nM_1300.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		RBM20_0nM_input.fastq.gz	ENCODE4
TIS11D_0nM_5.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		RBM20_0nM_input.fastq.gz	ENCODE4
TIS11D_0nM_80.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		RBM20_0nM_input.fastq.gz	ENCODE4
TIS11D_0nM_input.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab			ENCODE4
TIS11D_0nM_6mer_logo0.PWM.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	TIS11D_0nM_1300.fastq.gz,TIS11D_0nM_5.fastq.gz,TIS11D_0nM_80.fastq.gz,RBM20_0nM_input.fastq.gz		ENCODE4
TIS11D_0nM_6mer_logo1.PWM.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	TIS11D_0nM_1300.fastq.gz,TIS11D_0nM_5.fastq.gz,TIS11D_0nM_80.fastq.gz,RBM20_0nM_input.fastq.gz		ENCODE4
TIS11D_0nM_enrichment_R.4mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	TIS11D_0nM_1300.fastq.gz,TIS11D_0nM_5.fastq.gz,TIS11D_0nM_80.fastq.gz,RBM20_0nM_input.fastq.gz		ENCODE4
TIS11D_0nM_enrichment_R.5mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	TIS11D_0nM_1300.fastq.gz,TIS11D_0nM_5.fastq.gz,TIS11D_0nM_80.fastq.gz,RBM20_0nM_input.fastq.gz		ENCODE4
TIS11D_0nM_enrichment_R.6mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	TIS11D_0nM_1300.fastq.gz,TIS11D_0nM_5.fastq.gz,TIS11D_0nM_80.fastq.gz,RBM20_0nM_input.fastq.gz		ENCODE4
TIS11D_0nM_enrichment_R.7mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	TIS11D_0nM_1300.fastq.gz,TIS11D_0nM_5.fastq.gz,TIS11D_0nM_80.fastq.gz,RBM20_0nM_input.fastq.gz		ENCODE4
TIS11D_0nM_6mer_seqlogos.png	png	document	RNA Bind-n-Seq	Burge Lab			ENCODE4
TIS11D.png	png	document	RNA Bind-n-Seq	Burge Lab			ENCODE4