ENCORE RBNS:ZFP36L1

ZFP36L1 RNA Bind-n-Seq

Experiment Information (Status: Released)


RBP	ZFP36L1
gene_aliases	TIS11B
Status	Released
Status_date	2020-12-07
Project	ENCODE4
Note
ID	3

Motif Logo

Sample Information

Sample_Name	Sample_Type	Read_size_range	rbns_protein_concentration	FILE_ID
ZFP36L1-1300	RBNS	20-20	1300	TIS11B_0nM_1300.fastq.gz
ZFP36L1-5	RBNS	20-20	5	TIS11B_0nM_5.fastq.gz
ZFP36L1-80	RBNS	20-20	80	TIS11B_0nM_80.fastq.gz
ZFP36L1-input	CN	20-20	0	TIS11B_0nM_input.fastq.gz

Data Submission Information

ENCODE_alias	ENCODE_accession	object_type	assay_type	Sample_ID	SAMPLENAMEID	Selected	Status	Status_Date	Project	protocol_folder	protocol_file_name	ID
chris-burge:ZFP36L1	ENCSR570AIV	experiment	RNA Bind-n-Seq	ZFP36L1	ANXA2-BGHcLV12-3	Yes	Released	2020-11-23	ENCODE4			1715
chris-burge:lib-ZFP36L1-1300	ENCLB828VNJ	library	RNA Bind-n-Seq	ZFP36L1	ANXA2-BGHcLV12-3	Yes	Released	2020-11-23	ENCODE4			1738
chris-burge:lib-ZFP36L1-5	ENCLB572MQE	library	RNA Bind-n-Seq	ZFP36L1	ANXA2-BGHcLV12-4	Yes	Released	2020-11-23	ENCODE4			1739
chris-burge:lib-ZFP36L1-80	ENCLB817YMV	library	RNA Bind-n-Seq	ZFP36L1	CIRBP-BGHcLV12-19	Yes	Released	2020-11-23	ENCODE4			1740
chris-burge:TIS11B_0nM_1300.fastq.gz	ENCFF838TGG	file_fastq	RNA Bind-n-Seq	ZFP36L1	ANXA2-BGHcLV12-3	Yes	Released	2020-11-23	ENCODE4			1789
chris-burge:TIS11B_0nM_5.fastq.gz	ENCFF573PAZ	file_fastq	RNA Bind-n-Seq	ZFP36L1	ANXA2-BGHcLV12-4	Yes	Released	2020-11-23	ENCODE4			1790
chris-burge:TIS11B_0nM_80.fastq.gz	ENCFF676GIJ	file_fastq	RNA Bind-n-Seq	ZFP36L1	CIRBP-BGHcLV12-19	Yes	Released	2020-11-23	ENCODE4			1791
chris-burge:TIS11B_0nM_6mer_logo0.PWM.txt	ENCFF951HUV	file_pwm	RNA Bind-n-Seq	ZFP36L1	ANXA2-BGHcLV12-3	Yes	Released	2020-11-23	ENCODE4			1833
chris-burge:TIS11B_0nM_6mer_logo1.PWM.txt	ENCFF845KBZ	file_pwm	RNA Bind-n-Seq	ZFP36L1	ANXA2-BGHcLV12-3	Yes	Released	2020-11-23	ENCODE4			1834
chris-burge:TIS11B_0nM_enrichment_R.4mers.txt	ENCFF525ZWW	file_enrichment	RNA Bind-n-Seq	ZFP36L1	ANXA2-BGHcLV12-3	Yes	Released	2020-11-23	ENCODE4			1835
chris-burge:TIS11B_0nM_enrichment_R.5mers.txt	ENCFF518BOX	file_enrichment	RNA Bind-n-Seq	ZFP36L1	ANXA2-BGHcLV12-3	Yes	Released	2020-11-23	ENCODE4			1836
chris-burge:TIS11B_0nM_enrichment_R.6mers.txt	ENCFF152EYR	file_enrichment	RNA Bind-n-Seq	ZFP36L1	ANXA2-BGHcLV12-3	Yes	Released	2020-11-23	ENCODE4			1837
chris-burge:TIS11B_0nM_enrichment_R.7mers.txt	ENCFF063FIR	file_enrichment	RNA Bind-n-Seq	ZFP36L1	ANXA2-BGHcLV12-3	Yes	Released	2020-11-23	ENCODE4			1838

File Information

file_name	file_format	output_type	assay_type	lab	derived_from	controlled_by	Project	Note
TIS11B_0nM_1300.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		RBM20_0nM_input.fastq.gz	ENCODE4
TIS11B_0nM_5.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		RBM20_0nM_input.fastq.gz	ENCODE4
TIS11B_0nM_80.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		RBM20_0nM_input.fastq.gz	ENCODE4
TIS11B_0nM_input.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab			ENCODE4
TIS11B_0nM_6mer_logo0.PWM.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	TIS11B_0nM_1300.fastq.gz,TIS11B_0nM_5.fastq.gz,TIS11B_0nM_80.fastq.gz,RBM20_0nM_input.fastq.gz		ENCODE4
TIS11B_0nM_6mer_logo1.PWM.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	TIS11B_0nM_1300.fastq.gz,TIS11B_0nM_5.fastq.gz,TIS11B_0nM_80.fastq.gz,RBM20_0nM_input.fastq.gz		ENCODE4
TIS11B_0nM_enrichment_R.4mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	TIS11B_0nM_1300.fastq.gz,TIS11B_0nM_5.fastq.gz,TIS11B_0nM_80.fastq.gz,RBM20_0nM_input.fastq.gz		ENCODE4
TIS11B_0nM_enrichment_R.5mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	TIS11B_0nM_1300.fastq.gz,TIS11B_0nM_5.fastq.gz,TIS11B_0nM_80.fastq.gz,RBM20_0nM_input.fastq.gz		ENCODE4
TIS11B_0nM_enrichment_R.6mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	TIS11B_0nM_1300.fastq.gz,TIS11B_0nM_5.fastq.gz,TIS11B_0nM_80.fastq.gz,RBM20_0nM_input.fastq.gz		ENCODE4
TIS11B_0nM_enrichment_R.7mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	TIS11B_0nM_1300.fastq.gz,TIS11B_0nM_5.fastq.gz,TIS11B_0nM_80.fastq.gz,RBM20_0nM_input.fastq.gz		ENCODE4
TIS11B_0nM_6mer_seqlogos.png	png	document	RNA Bind-n-Seq	Burge Lab			ENCODE4
TIS11B.png	png	document	RNA Bind-n-Seq	Burge Lab			ENCODE4