Experiment Information (Status: Released)

RBP	SRSF2
gene_aliases
Status	Released
Status_date	2022-07-15
Project	ENCODE3
Note
ID	71

Motif Logo

Sample Information

Sample_Name	Sample_Type	Read_size_range	rbns_protein_concentration	FILE_ID
SRSF2-mockPD	CN	20-20	0	SRSF2_0.fastq.gz
SRSF2-1300	RBNS	20-20	1300	SRSF2_1300.fastq.gz
SRSF2-20	RBNS	20-20	20	SRSF2_20.fastq.gz
SRSF2-320	RBNS	20-20	320	SRSF2_320.fastq.gz
SRSF2-5	RBNS	20-20	5	SRSF2_5.fastq.gz
SRSF2-80	RBNS	20-20	80	SRSF2_80.fastq.gz
SRSF2-input	CN	20-20	0	SRSF2_input.fastq.gz

Data Submission Information

ENCODE_alias	ENCODE_accession	object_type	assay_type	Sample_ID	SAMPLENAMEID	Selected	Status	Status_Date	Project	protocol_folder	protocol_file_name	ID
chris-burge:SRSF2	ENCSR275JFN	experiment	RNA Bind-n-Seq	SRSF2	YBX1-BGKcLV15-64	Yes	Released	2022-07-12	ENCODE3			8119
chris-burge:SRSF2-input-cntl	ENCSR694VQW	experiment	RNA Bind-n-Seq	SRSF2	NT-BGHcLV16-1	Yes	Released	2022-07-12	ENCODE3			8120
chris-burge:SRSF2-mockPD-cntl	ENCSR960GMF	experiment	RNA Bind-n-Seq	SRSF2	YBX1-BGKcLV15-63	Yes	Released	2022-07-12	ENCODE3			8121
chris-burge:lib-SRSF2-1	ENCLB633ZYN	library	RNA Bind-n-Seq	SRSF2	NT-BGHcLV05-1E	Yes	Released	2022-07-12	ENCODE3			8549
chris-burge:lib-SRSF2-2	ENCLB634AYO	library	RNA Bind-n-Seq	SRSF2	GNL3-BGHcLV05-19E	Yes	Released	2022-07-12	ENCODE3			8550
chris-burge:lib-SRSF2-3	ENCLB393TBE	library	RNA Bind-n-Seq	SRSF2	NT-BGHcLV05-2E	Yes	Released	2022-07-12	ENCODE3			8551
chris-burge:lib-SRSF2-4	ENCLB588RFB	library	RNA Bind-n-Seq	SRSF2	GNL3-BGHcLV05-20E	Yes	Released	2022-07-12	ENCODE3			8552
chris-burge:lib-SRSF2-5	ENCLB209ERA	library	RNA Bind-n-Seq	SRSF2	YBX1-BGKcLV15-64	Yes	Released	2022-07-12	ENCODE3			8553
chris-burge:lib-SRSF2-input-cntl	ENCLB818BZI	library	RNA Bind-n-Seq	SRSF2	NT-BGHcLV16-1	Yes	Released	2022-07-12	ENCODE3			8554
chris-burge:lib-SRSF2-mockPD-cntl	ENCLB482JRR	library	RNA Bind-n-Seq	SRSF2	YBX1-BGKcLV15-63	Yes	Released	2022-07-12	ENCODE3			8555
chris-burge:SRSF2_0.fastq.gz	ENCFF889JSB	file_fastq	RNA Bind-n-Seq	SRSF2	YBX1-BGKcLV15-63	Yes	Released	2022-07-14	ENCODE3			8950
chris-burge:SRSF2_1300.fastq.gz	ENCFF395BSA	file_fastq	RNA Bind-n-Seq	SRSF2	YBX1-BGKcLV15-64	Yes	Released	2022-07-14	ENCODE3			8951
chris-burge:SRSF2_20.fastq.gz	ENCFF203RCX	file_fastq	RNA Bind-n-Seq	SRSF2	GNL3-BGHcLV05-19E	Yes	Released	2022-07-14	ENCODE3			8952
chris-burge:SRSF2_320.fastq.gz	ENCFF044HZO	file_fastq	RNA Bind-n-Seq	SRSF2	GNL3-BGHcLV05-20E	Yes	Released	2022-07-14	ENCODE3			8953
chris-burge:SRSF2_5.fastq.gz	ENCFF443RLZ	file_fastq	RNA Bind-n-Seq	SRSF2	NT-BGHcLV05-1E	Yes	Released	2022-07-14	ENCODE3			8954
chris-burge:SRSF2_80.fastq.gz	ENCFF427KXG	file_fastq	RNA Bind-n-Seq	SRSF2	NT-BGHcLV05-2E	Yes	Released	2022-07-14	ENCODE3			8955
chris-burge:SRSF2_input.fastq.gz	ENCFF087BBT	file_fastq	RNA Bind-n-Seq	SRSF2	NT-BGHcLV16-1	Yes	Released	2022-07-14	ENCODE3			8956
chris-burge:SRSF2_enrichment_R.4mers.txt	ENCFF257EQJ	file_enrichment	RNA Bind-n-Seq	SRSF2	YBX1-BGKcLV15-64	Yes	Released	2022-07-14	ENCODE3			9475
chris-burge:SRSF2_enrichment_R.5mers.txt	ENCFF900EPD	file_enrichment	RNA Bind-n-Seq	SRSF2	YBX1-BGKcLV15-64	Yes	Released	2022-07-14	ENCODE3			9476
chris-burge:SRSF2_enrichment_R.6mers.txt	ENCFF573MYB	file_enrichment	RNA Bind-n-Seq	SRSF2	YBX1-BGKcLV15-64	Yes	Released	2022-07-14	ENCODE3			9477
chris-burge:SRSF2_est_binding_frac.4mers.txt	ENCFF289NBX	file_library-fraction	RNA Bind-n-Seq	SRSF2	YBX1-BGKcLV15-64	Yes	Released	2022-07-14	ENCODE3			9478
chris-burge:SRSF2_est_binding_frac.5mers.txt	ENCFF616GTT	file_library-fraction	RNA Bind-n-Seq	SRSF2	YBX1-BGKcLV15-64	Yes	Released	2022-07-14	ENCODE3			9479
chris-burge:SRSF2_est_binding_frac.6mers.txt	ENCFF395YYT	file_library-fraction	RNA Bind-n-Seq	SRSF2	YBX1-BGKcLV15-64	Yes	Released	2022-07-14	ENCODE3			9480

File Information

file_name	file_format	output_type	assay_type	lab	derived_from	controlled_by	Project	Note
SRSF2.logo.png	png	document	RNA Bind-n-Seq	Burge Lab			ENCODE3
SRSF2_0.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab			ENCODE3
SRSF2_1300.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		SRSF2_0.fastq.gz,SRSF2_input.fastq.gz	ENCODE3
SRSF2_20.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		SRSF2_0.fastq.gz,SRSF2_input.fastq.gz	ENCODE3
SRSF2_320.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		SRSF2_0.fastq.gz,SRSF2_input.fastq.gz	ENCODE3
SRSF2_5.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		SRSF2_0.fastq.gz,SRSF2_input.fastq.gz	ENCODE3
SRSF2_80.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		SRSF2_0.fastq.gz,SRSF2_input.fastq.gz	ENCODE3
SRSF2_input.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab			ENCODE3
SRSF2_enrichment_R.4mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	SRSF2_0.fastq.gz,SRSF2_1300.fastq.gz,SRSF2_20.fastq.gz,SRSF2_320.fastq.gz,SRSF2_5.fastq.gz,SRSF2_80.fastq.gz,SRSF2_input.fastq.gz		ENCODE3
SRSF2_est_binding_frac.4mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	SRSF2_0.fastq.gz,SRSF2_1300.fastq.gz,SRSF2_20.fastq.gz,SRSF2_320.fastq.gz,SRSF2_5.fastq.gz,SRSF2_80.fastq.gz,SRSF2_input.fastq.gz		ENCODE3
SRSF2_enrichment_R.5mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	SRSF2_0.fastq.gz,SRSF2_1300.fastq.gz,SRSF2_20.fastq.gz,SRSF2_320.fastq.gz,SRSF2_5.fastq.gz,SRSF2_80.fastq.gz,SRSF2_input.fastq.gz		ENCODE3
SRSF2_est_binding_frac.5mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	SRSF2_0.fastq.gz,SRSF2_1300.fastq.gz,SRSF2_20.fastq.gz,SRSF2_320.fastq.gz,SRSF2_5.fastq.gz,SRSF2_80.fastq.gz,SRSF2_input.fastq.gz		ENCODE3
SRSF2_enrichment_R.6mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	SRSF2_0.fastq.gz,SRSF2_1300.fastq.gz,SRSF2_20.fastq.gz,SRSF2_320.fastq.gz,SRSF2_5.fastq.gz,SRSF2_80.fastq.gz,SRSF2_input.fastq.gz		ENCODE3
SRSF2_est_binding_frac.6mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	SRSF2_0.fastq.gz,SRSF2_1300.fastq.gz,SRSF2_20.fastq.gz,SRSF2_320.fastq.gz,SRSF2_5.fastq.gz,SRSF2_80.fastq.gz,SRSF2_input.fastq.gz		ENCODE3