Experiment Information (Status: Released)

RBP	SRSF11
gene_aliases
Status	Released
Status_date	2022-07-15
Project	ENCODE3
Note
ID	93

Motif Logo

Sample Information

Sample_Name	Sample_Type	Read_size_range	rbns_protein_concentration	FILE_ID
SRSF11-1300	RBNS	20-20	1300	SRSF11_1300.fastq.gz
SRSF11-20	RBNS	20-20	20	SRSF11_20.fastq.gz
SRSF11-320	RBNS	20-20	320	SRSF11_320.fastq.gz
SRSF11-5	RBNS	20-20	5	SRSF11_5.fastq.gz
SRSF11-80	RBNS	20-20	80	SRSF11_80.fastq.gz
SRSF11-input	CN	20-20	0	SRSF11_input.fastq.gz

Data Submission Information

ENCODE_alias	ENCODE_accession	object_type	assay_type	Sample_ID	SAMPLENAMEID	Selected	Status	Status_Date	Project	protocol_folder	protocol_file_name	ID
chris-burge:SRSF11	ENCSR073DSH	experiment	RNA Bind-n-Seq	SRSF11		Yes	Released	2022-07-12	ENCODE3			8117
chris-burge:SRSF11-input-cntl	ENCSR418ZPZ	experiment	RNA Bind-n-Seq	SRSF11		Yes	Released	2022-07-12	ENCODE3			8118
chris-burge:lib-SRSF11-1	ENCLB421SGZ	library	RNA Bind-n-Seq	SRSF11		Yes	Released	2022-07-12	ENCODE3			8543
chris-burge:lib-SRSF11-2	ENCLB115MNI	library	RNA Bind-n-Seq	SRSF11		Yes	Released	2022-07-12	ENCODE3			8544
chris-burge:lib-SRSF11-3	ENCLB632SGR	library	RNA Bind-n-Seq	SRSF11		Yes	Released	2022-07-12	ENCODE3			8545
chris-burge:lib-SRSF11-4	ENCLB678MYY	library	RNA Bind-n-Seq	SRSF11		Yes	Released	2022-07-12	ENCODE3			8546
chris-burge:lib-SRSF11-5	ENCLB938LSN	library	RNA Bind-n-Seq	SRSF11		Yes	Released	2022-07-12	ENCODE3			8547
chris-burge:lib-SRSF11-input-cntl	ENCLB966TNF	library	RNA Bind-n-Seq	SRSF11		Yes	Released	2022-07-12	ENCODE3			8548
chris-burge:SRSF11_1300.fastq.gz	ENCFF795EEX	file_fastq	RNA Bind-n-Seq	SRSF11		Yes	Released	2022-07-14	ENCODE3			8944
chris-burge:SRSF11_20.fastq.gz	ENCFF205NWX	file_fastq	RNA Bind-n-Seq	SRSF11		Yes	Released	2022-07-14	ENCODE3			8945
chris-burge:SRSF11_320.fastq.gz	ENCFF828WZL	file_fastq	RNA Bind-n-Seq	SRSF11		Yes	Released	2022-07-14	ENCODE3			8946
chris-burge:SRSF11_5.fastq.gz	ENCFF877DUW	file_fastq	RNA Bind-n-Seq	SRSF11		Yes	Released	2022-07-14	ENCODE3			8947
chris-burge:SRSF11_80.fastq.gz	ENCFF040OXG	file_fastq	RNA Bind-n-Seq	SRSF11		Yes	Released	2022-07-14	ENCODE3			8948
chris-burge:SRSF11_input.fastq.gz	ENCFF248EWX	file_fastq	RNA Bind-n-Seq	SRSF11		Yes	Released	2022-07-14	ENCODE3			8949
chris-burge:SRSF11_enrichment_R.4mers.txt	ENCFF431TKD	file_enrichment	RNA Bind-n-Seq	SRSF11		Yes	Released	2022-07-14	ENCODE3			9467
chris-burge:SRSF11_enrichment_R.5mers.txt	ENCFF621BGN	file_enrichment	RNA Bind-n-Seq	SRSF11		Yes	Released	2022-07-14	ENCODE3			9468
chris-burge:SRSF11_enrichment_R.6mers.txt	ENCFF820GEE	file_enrichment	RNA Bind-n-Seq	SRSF11		Yes	Released	2022-07-14	ENCODE3			9469
chris-burge:SRSF11_enrichment_R.7mers.txt	ENCFF260EGH	file_enrichment	RNA Bind-n-Seq	SRSF11		Yes	Released	2022-07-14	ENCODE3			9470
chris-burge:SRSF11_est_binding_frac.4mers.txt	ENCFF206YND	file_library-fraction	RNA Bind-n-Seq	SRSF11		Yes	Released	2022-07-14	ENCODE3			9471
chris-burge:SRSF11_est_binding_frac.5mers.txt	ENCFF279RSC	file_library-fraction	RNA Bind-n-Seq	SRSF11		Yes	Released	2022-07-14	ENCODE3			9472
chris-burge:SRSF11_est_binding_frac.6mers.txt	ENCFF283VSZ	file_library-fraction	RNA Bind-n-Seq	SRSF11		Yes	Released	2022-07-14	ENCODE3			9473
chris-burge:SRSF11_est_binding_frac.7mers.txt	ENCFF186POK	file_library-fraction	RNA Bind-n-Seq	SRSF11		Yes	Released	2022-07-14	ENCODE3			9474

File Information

file_name	file_format	output_type	assay_type	lab	derived_from	controlled_by	Project	Note
SRSF11.logo.png	png	document	RNA Bind-n-Seq	Burge Lab			ENCODE3
SRSF11_1300.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		SRSF11_input.fastq.gz	ENCODE3
SRSF11_20.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		SRSF11_input.fastq.gz	ENCODE3
SRSF11_320.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		SRSF11_input.fastq.gz	ENCODE3
SRSF11_5.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		SRSF11_input.fastq.gz	ENCODE3
SRSF11_80.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		SRSF11_input.fastq.gz	ENCODE3
SRSF11_input.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab			ENCODE3
SRSF11_enrichment_R.4mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	SRSF11_1300.fastq.gz,SRSF11_20.fastq.gz,SRSF11_320.fastq.gz,SRSF11_5.fastq.gz,SRSF11_80.fastq.gz,SRSF11_input.fastq.gz		ENCODE3
SRSF11_est_binding_frac.4mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	SRSF11_1300.fastq.gz,SRSF11_20.fastq.gz,SRSF11_320.fastq.gz,SRSF11_5.fastq.gz,SRSF11_80.fastq.gz,SRSF11_input.fastq.gz		ENCODE3
SRSF11_enrichment_R.5mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	SRSF11_1300.fastq.gz,SRSF11_20.fastq.gz,SRSF11_320.fastq.gz,SRSF11_5.fastq.gz,SRSF11_80.fastq.gz,SRSF11_input.fastq.gz		ENCODE3
SRSF11_est_binding_frac.5mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	SRSF11_1300.fastq.gz,SRSF11_20.fastq.gz,SRSF11_320.fastq.gz,SRSF11_5.fastq.gz,SRSF11_80.fastq.gz,SRSF11_input.fastq.gz		ENCODE3
SRSF11_enrichment_R.6mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	SRSF11_1300.fastq.gz,SRSF11_20.fastq.gz,SRSF11_320.fastq.gz,SRSF11_5.fastq.gz,SRSF11_80.fastq.gz,SRSF11_input.fastq.gz		ENCODE3
SRSF11_est_binding_frac.6mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	SRSF11_1300.fastq.gz,SRSF11_20.fastq.gz,SRSF11_320.fastq.gz,SRSF11_5.fastq.gz,SRSF11_80.fastq.gz,SRSF11_input.fastq.gz		ENCODE3
SRSF11_enrichment_R.7mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	SRSF11_1300.fastq.gz,SRSF11_20.fastq.gz,SRSF11_320.fastq.gz,SRSF11_5.fastq.gz,SRSF11_80.fastq.gz,SRSF11_input.fastq.gz		ENCODE3
SRSF11_est_binding_frac.7mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	SRSF11_1300.fastq.gz,SRSF11_20.fastq.gz,SRSF11_320.fastq.gz,SRSF11_5.fastq.gz,SRSF11_80.fastq.gz,SRSF11_input.fastq.gz		ENCODE3