Experiment Information (Status: Released)

RBP	RC3H1
gene_aliases
Status	Released
Status_date	2022-07-15
Project	ENCODE3
Note
ID	30

Motif Logo

Sample Information

Sample_Name	Sample_Type	Read_size_range	rbns_protein_concentration	FILE_ID
RC3H1-1300	RBNS	20-20	1300	RC3H1_1300.fastq.gz
RC3H1-20	RBNS	20-20	20	RC3H1_20.fastq.gz
RC3H1-320	RBNS	20-20	320	RC3H1_320.fastq.gz
RC3H1-5	RBNS	20-20	5	RC3H1_5.fastq.gz
RC3H1-80	RBNS	20-20	80	RC3H1_80.fastq.gz
RC3H1-input	CN	20-20	0	RC3H1_input.fastq.gz

Data Submission Information

ENCODE_alias	ENCODE_accession	object_type	assay_type	Sample_ID	SAMPLENAMEID	Selected	Status	Status_Date	Project	protocol_folder	protocol_file_name	ID
chris-burge:RC3H1	ENCSR728SXZ	experiment	RNA Bind-n-Seq	RC3H1		Yes	Released	2022-07-12	ENCODE3			8108
chris-burge:RC3H1-input-cntl	ENCSR360QVI	experiment	RNA Bind-n-Seq	RC3H1		Yes	Released	2022-07-12	ENCODE3			8109
chris-burge:lib-RC3H1-1	ENCLB202RCS	library	RNA Bind-n-Seq	RC3H1		Yes	Released	2022-07-12	ENCODE3			8509
chris-burge:lib-RC3H1-2	ENCLB866YYJ	library	RNA Bind-n-Seq	RC3H1		Yes	Released	2022-07-12	ENCODE3			8510
chris-burge:lib-RC3H1-3	ENCLB713MAH	library	RNA Bind-n-Seq	RC3H1		Yes	Released	2022-07-12	ENCODE3			8511
chris-burge:lib-RC3H1-4	ENCLB133BBZ	library	RNA Bind-n-Seq	RC3H1		Yes	Released	2022-07-12	ENCODE3			8512
chris-burge:lib-RC3H1-5	ENCLB912EAS	library	RNA Bind-n-Seq	RC3H1		Yes	Released	2022-07-12	ENCODE3			8513
chris-burge:lib-RC3H1-input-cntl	ENCLB201FLQ	library	RNA Bind-n-Seq	RC3H1		Yes	Released	2022-07-12	ENCODE3			8514
chris-burge:RC3H1_1300.fastq.gz	ENCFF607ZLL	file_fastq	RNA Bind-n-Seq	RC3H1		Yes	Released	2022-07-14	ENCODE3			8910
chris-burge:RC3H1_20.fastq.gz	ENCFF540SRD	file_fastq	RNA Bind-n-Seq	RC3H1		Yes	Released	2022-07-14	ENCODE3			8911
chris-burge:RC3H1_320.fastq.gz	ENCFF732QEB	file_fastq	RNA Bind-n-Seq	RC3H1		Yes	Released	2022-07-14	ENCODE3			8912
chris-burge:RC3H1_5.fastq.gz	ENCFF189FRP	file_fastq	RNA Bind-n-Seq	RC3H1		Yes	Released	2022-07-14	ENCODE3			8913
chris-burge:RC3H1_80.fastq.gz	ENCFF393MNZ	file_fastq	RNA Bind-n-Seq	RC3H1		Yes	Released	2022-07-14	ENCODE3			8914
chris-burge:RC3H1_input.fastq.gz	ENCFF016HYN	file_fastq	RNA Bind-n-Seq	RC3H1		Yes	Released	2022-07-14	ENCODE3			8915
chris-burge:RC3H1_enrichment_R.4mers.txt	ENCFF140TLP	file_enrichment	RNA Bind-n-Seq	RC3H1		Yes	Released	2022-07-14	ENCODE3			9421
chris-burge:RC3H1_enrichment_R.5mers.txt	ENCFF661BCA	file_enrichment	RNA Bind-n-Seq	RC3H1		Yes	Released	2022-07-14	ENCODE3			9422
chris-burge:RC3H1_enrichment_R.6mers.txt	ENCFF792ROS	file_enrichment	RNA Bind-n-Seq	RC3H1		Yes	Released	2022-07-14	ENCODE3			9423
chris-burge:RC3H1_enrichment_R.7mers.txt	ENCFF083LIF	file_enrichment	RNA Bind-n-Seq	RC3H1		Yes	Released	2022-07-14	ENCODE3			9424
chris-burge:RC3H1_est_binding_frac.4mers.txt	ENCFF870TDL	file_library-fraction	RNA Bind-n-Seq	RC3H1		Yes	Released	2022-07-14	ENCODE3			9425
chris-burge:RC3H1_est_binding_frac.5mers.txt	ENCFF597IYF	file_library-fraction	RNA Bind-n-Seq	RC3H1		Yes	Released	2022-07-14	ENCODE3			9426
chris-burge:RC3H1_est_binding_frac.6mers.txt	ENCFF099SQP	file_library-fraction	RNA Bind-n-Seq	RC3H1		Yes	Released	2022-07-14	ENCODE3			9427
chris-burge:RC3H1_est_binding_frac.7mers.txt	ENCFF222OVF	file_library-fraction	RNA Bind-n-Seq	RC3H1		Yes	Released	2022-07-14	ENCODE3			9428

File Information

file_name	file_format	output_type	assay_type	lab	derived_from	controlled_by	Project	Note
RC3H1.logo.png	png	document	RNA Bind-n-Seq	Burge Lab			ENCODE3
RC3H1_1300.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		RC3H1_input.fastq.gz	ENCODE3
RC3H1_20.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		RC3H1_input.fastq.gz	ENCODE3
RC3H1_320.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		RC3H1_input.fastq.gz	ENCODE3
RC3H1_5.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		RC3H1_input.fastq.gz	ENCODE3
RC3H1_80.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		RC3H1_input.fastq.gz	ENCODE3
RC3H1_input.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab			ENCODE3
RC3H1_enrichment_R.4mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	RC3H1_1300.fastq.gz,RC3H1_20.fastq.gz,RC3H1_320.fastq.gz,RC3H1_5.fastq.gz,RC3H1_80.fastq.gz,RC3H1_input.fastq.gz		ENCODE3
RC3H1_est_binding_frac.4mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	RC3H1_1300.fastq.gz,RC3H1_20.fastq.gz,RC3H1_320.fastq.gz,RC3H1_5.fastq.gz,RC3H1_80.fastq.gz,RC3H1_input.fastq.gz		ENCODE3
RC3H1_enrichment_R.5mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	RC3H1_1300.fastq.gz,RC3H1_20.fastq.gz,RC3H1_320.fastq.gz,RC3H1_5.fastq.gz,RC3H1_80.fastq.gz,RC3H1_input.fastq.gz		ENCODE3
RC3H1_est_binding_frac.5mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	RC3H1_1300.fastq.gz,RC3H1_20.fastq.gz,RC3H1_320.fastq.gz,RC3H1_5.fastq.gz,RC3H1_80.fastq.gz,RC3H1_input.fastq.gz		ENCODE3
RC3H1_enrichment_R.6mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	RC3H1_1300.fastq.gz,RC3H1_20.fastq.gz,RC3H1_320.fastq.gz,RC3H1_5.fastq.gz,RC3H1_80.fastq.gz,RC3H1_input.fastq.gz		ENCODE3
RC3H1_est_binding_frac.6mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	RC3H1_1300.fastq.gz,RC3H1_20.fastq.gz,RC3H1_320.fastq.gz,RC3H1_5.fastq.gz,RC3H1_80.fastq.gz,RC3H1_input.fastq.gz		ENCODE3
RC3H1_enrichment_R.7mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	RC3H1_1300.fastq.gz,RC3H1_20.fastq.gz,RC3H1_320.fastq.gz,RC3H1_5.fastq.gz,RC3H1_80.fastq.gz,RC3H1_input.fastq.gz		ENCODE3
RC3H1_est_binding_frac.7mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	RC3H1_1300.fastq.gz,RC3H1_20.fastq.gz,RC3H1_320.fastq.gz,RC3H1_5.fastq.gz,RC3H1_80.fastq.gz,RC3H1_input.fastq.gz		ENCODE3