Experiment Information (Status: Released)

RBP	RBM6
gene_aliases
Status	Released
Status_date	2022-07-15
Project	ENCODE3
Note
ID	59

Motif Logo

Sample Information

Sample_Name	Sample_Type	Read_size_range	rbns_protein_concentration	FILE_ID
RBM6-1300	RBNS	20-20	1300	RBM6_1300.fastq.gz
RBM6-20	RBNS	20-20	20	RBM6_20.fastq.gz
RBM6-320	RBNS	20-20	320	RBM6_320.fastq.gz
RBM6-5	RBNS	20-20	5	RBM6_5.fastq.gz
RBM6-80	RBNS	20-20	80	RBM6_80.fastq.gz
RBM6-input	CN	20-20	0	RBM6_input.fastq.gz

Data Submission Information

ENCODE_alias	ENCODE_accession	object_type	assay_type	Sample_ID	SAMPLENAMEID	Selected	Status	Status_Date	Project	protocol_folder	protocol_file_name	ID
chris-burge:RBM6	ENCSR548RVM	experiment	RNA Bind-n-Seq	RBM6		Yes	Released	2022-07-12	ENCODE3			8102
chris-burge:RBM6_RBM24-input-cntl	ENCSR721PRM	experiment	RNA Bind-n-Seq	RBM6		Yes	Released	2022-07-12	ENCODE3			8103
chris-burge:lib-RBM6_RBM24-input-cntl	ENCLB589OLX	library	RNA Bind-n-Seq	RBM6		Yes	Released	2022-07-12	ENCODE3			8492
chris-burge:lib-RBM6-1	ENCLB252QLS	library	RNA Bind-n-Seq	RBM6		Yes	Released	2022-07-12	ENCODE3			8493
chris-burge:lib-RBM6-2	ENCLB294ZRQ	library	RNA Bind-n-Seq	RBM6		Yes	Released	2022-07-12	ENCODE3			8494
chris-burge:lib-RBM6-3	ENCLB258GGK	library	RNA Bind-n-Seq	RBM6		Yes	Released	2022-07-12	ENCODE3			8495
chris-burge:lib-RBM6-4	ENCLB929DSU	library	RNA Bind-n-Seq	RBM6		Yes	Released	2022-07-12	ENCODE3			8496
chris-burge:lib-RBM6-5	ENCLB553RIY	library	RNA Bind-n-Seq	RBM6		Yes	Released	2022-07-12	ENCODE3			8497
chris-burge:RBM6_1300.fastq.gz	ENCFF796ZYM	file_fastq	RNA Bind-n-Seq	RBM6		Yes	Released	2022-07-14	ENCODE3			8893
chris-burge:RBM6_20.fastq.gz	ENCFF229GWE	file_fastq	RNA Bind-n-Seq	RBM6		Yes	Released	2022-07-14	ENCODE3			8894
chris-burge:RBM6_320.fastq.gz	ENCFF880ULO	file_fastq	RNA Bind-n-Seq	RBM6		Yes	Released	2022-07-14	ENCODE3			8895
chris-burge:RBM6_5.fastq.gz	ENCFF002VNX	file_fastq	RNA Bind-n-Seq	RBM6		Yes	Released	2022-07-14	ENCODE3			8896
chris-burge:RBM6_80.fastq.gz	ENCFF133WMF	file_fastq	RNA Bind-n-Seq	RBM6		Yes	Released	2022-07-14	ENCODE3			8897
chris-burge:RBM6_input.fastq.gz	ENCFF771ECU	file_fastq	RNA Bind-n-Seq	RBM6		Yes	Released	2022-07-14	ENCODE3			8898
chris-burge:RBM6_enrichment_R.4mers.txt	ENCFF150OOG	file_enrichment	RNA Bind-n-Seq	RBM6		Yes	Released	2022-07-14	ENCODE3			9397
chris-burge:RBM6_enrichment_R.5mers.txt	ENCFF612PCY	file_enrichment	RNA Bind-n-Seq	RBM6		Yes	Released	2022-07-14	ENCODE3			9398
chris-burge:RBM6_enrichment_R.6mers.txt	ENCFF793PCZ	file_enrichment	RNA Bind-n-Seq	RBM6		Yes	Released	2022-07-14	ENCODE3			9399
chris-burge:RBM6_enrichment_R.7mers.txt	ENCFF191CTZ	file_enrichment	RNA Bind-n-Seq	RBM6		Yes	Released	2022-07-14	ENCODE3			9400
chris-burge:RBM6_est_binding_frac.4mers.txt	ENCFF726YHH	file_library-fraction	RNA Bind-n-Seq	RBM6		Yes	Released	2022-07-14	ENCODE3			9401
chris-burge:RBM6_est_binding_frac.5mers.txt	ENCFF202DIL	file_library-fraction	RNA Bind-n-Seq	RBM6		Yes	Released	2022-07-14	ENCODE3			9402
chris-burge:RBM6_est_binding_frac.6mers.txt	ENCFF264BEX	file_library-fraction	RNA Bind-n-Seq	RBM6		Yes	Released	2022-07-14	ENCODE3			9403
chris-burge:RBM6_est_binding_frac.7mers.txt	ENCFF409JMW	file_library-fraction	RNA Bind-n-Seq	RBM6		Yes	Released	2022-07-14	ENCODE3			9404

File Information

file_name	file_format	output_type	assay_type	lab	derived_from	controlled_by	Project	Note
RBM6_5mer_seqlogos.png	png	document	RNA Bind-n-Seq	Burge Lab			ENCODE4
RBM6.logo.png	png	document	RNA Bind-n-Seq	Burge Lab			ENCODE3
RBM6_1300.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		RBM6_input.fastq.gz	ENCODE3
RBM6_20.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		RBM6_input.fastq.gz	ENCODE3
RBM6_320.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		RBM6_input.fastq.gz	ENCODE3
RBM6_5.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		RBM6_input.fastq.gz	ENCODE3
RBM6_80.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		RBM6_input.fastq.gz	ENCODE3
RBM6_input.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab			ENCODE3
RBM6_enrichment_R.4mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	RBM6_1300.fastq.gz,RBM6_20.fastq.gz,RBM6_320.fastq.gz,RBM6_5.fastq.gz,RBM6_80.fastq.gz,RBM6_input.fastq.gz		ENCODE3
RBM6_est_binding_frac.4mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	RBM6_1300.fastq.gz,RBM6_20.fastq.gz,RBM6_320.fastq.gz,RBM6_5.fastq.gz,RBM6_80.fastq.gz,RBM6_input.fastq.gz		ENCODE3
RBM6_enrichment_R.5mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	RBM6_1300.fastq.gz,RBM6_20.fastq.gz,RBM6_320.fastq.gz,RBM6_5.fastq.gz,RBM6_80.fastq.gz,RBM6_input.fastq.gz		ENCODE3
RBM6_est_binding_frac.5mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	RBM6_1300.fastq.gz,RBM6_20.fastq.gz,RBM6_320.fastq.gz,RBM6_5.fastq.gz,RBM6_80.fastq.gz,RBM6_input.fastq.gz		ENCODE3
RBM6_enrichment_R.6mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	RBM6_1300.fastq.gz,RBM6_20.fastq.gz,RBM6_320.fastq.gz,RBM6_5.fastq.gz,RBM6_80.fastq.gz,RBM6_input.fastq.gz		ENCODE3
RBM6_est_binding_frac.6mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	RBM6_1300.fastq.gz,RBM6_20.fastq.gz,RBM6_320.fastq.gz,RBM6_5.fastq.gz,RBM6_80.fastq.gz,RBM6_input.fastq.gz		ENCODE3
RBM6_enrichment_R.7mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	RBM6_1300.fastq.gz,RBM6_20.fastq.gz,RBM6_320.fastq.gz,RBM6_5.fastq.gz,RBM6_80.fastq.gz,RBM6_input.fastq.gz		ENCODE3
RBM6_est_binding_frac.7mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	RBM6_1300.fastq.gz,RBM6_20.fastq.gz,RBM6_320.fastq.gz,RBM6_5.fastq.gz,RBM6_80.fastq.gz,RBM6_input.fastq.gz		ENCODE3