ENCORE RBNS:RBM24

RBM24 RNA Bind-n-Seq

Experiment Information (Status: Released)


RBP	RBM24
gene_aliases
Status	Released
Status_date	2022-07-15
Project	ENCODE3
Note
ID	85

Motif Logo

Sample Information

Sample_Name	Sample_Type	Read_size_range	rbns_protein_concentration	FILE_ID
RBM24-1300	RBNS	20-20	1300	RBM24_1300.fastq.gz
RBM24-20	RBNS	20-20	20	RBM24_20.fastq.gz
RBM24-320	RBNS	20-20	320	RBM24_320.fastq.gz
RBM24-5	RBNS	20-20	5	RBM24_5.fastq.gz
RBM24-80	RBNS	20-20	80	RBM24_80.fastq.gz
RBM24-input	CN	20-20	0	RBM24_input.fastq.gz

Data Submission Information

ENCODE_alias	ENCODE_accession	object_type	assay_type	Sample_ID	SAMPLENAMEID	Selected	Status	Status_Date	Project	protocol_folder	protocol_file_name	ID
chris-burge:RBM24	ENCSR742AEU	experiment	RNA Bind-n-Seq	RBM24		Yes	Released	2022-07-12	ENCODE3			8091
chris-burge:lib-RBM24-1	ENCLB598GPP	library	RNA Bind-n-Seq	RBM24		Yes	Released	2022-07-12	ENCODE3			8453
chris-burge:lib-RBM24-2	ENCLB210BGX	library	RNA Bind-n-Seq	RBM24		Yes	Released	2022-07-12	ENCODE3			8454
chris-burge:lib-RBM24-3	ENCLB779HUA	library	RNA Bind-n-Seq	RBM24		Yes	Released	2022-07-12	ENCODE3			8455
chris-burge:lib-RBM24-4	ENCLB628AYL	library	RNA Bind-n-Seq	RBM24		Yes	Released	2022-07-12	ENCODE3			8456
chris-burge:lib-RBM24-5	ENCLB929GAJ	library	RNA Bind-n-Seq	RBM24		Yes	Released	2022-07-12	ENCODE3			8457
chris-burge:RBM24_1300.fastq.gz	ENCFF698TXB	file_fastq	RNA Bind-n-Seq	RBM24		Yes	Released	2022-07-14	ENCODE3			8854
chris-burge:RBM24_20.fastq.gz	ENCFF211URD	file_fastq	RNA Bind-n-Seq	RBM24		Yes	Released	2022-07-14	ENCODE3			8855
chris-burge:RBM24_320.fastq.gz	ENCFF583TUC	file_fastq	RNA Bind-n-Seq	RBM24		Yes	Released	2022-07-14	ENCODE3			8856
chris-burge:RBM24_5.fastq.gz	ENCFF355UIV	file_fastq	RNA Bind-n-Seq	RBM24		Yes	Released	2022-07-14	ENCODE3			8857
chris-burge:RBM24_80.fastq.gz	ENCFF948RIV	file_fastq	RNA Bind-n-Seq	RBM24		Yes	Released	2022-07-14	ENCODE3			8858
chris-burge:RBM24_enrichment_R.4mers.txt	ENCFF522SCZ	file_enrichment	RNA Bind-n-Seq	RBM24		Yes	Released	2022-07-14	ENCODE3			9341
chris-burge:RBM24_enrichment_R.5mers.txt	ENCFF044NVM	file_enrichment	RNA Bind-n-Seq	RBM24		Yes	Released	2022-07-14	ENCODE3			9342
chris-burge:RBM24_enrichment_R.6mers.txt	ENCFF168GEY	file_enrichment	RNA Bind-n-Seq	RBM24		Yes	Released	2022-07-14	ENCODE3			9343
chris-burge:RBM24_enrichment_R.7mers.txt	ENCFF132AEB	file_enrichment	RNA Bind-n-Seq	RBM24		Yes	Released	2022-07-14	ENCODE3			9344
chris-burge:RBM24_est_binding_frac.4mers.txt	ENCFF615IDC	file_library-fraction	RNA Bind-n-Seq	RBM24		Yes	Released	2022-07-14	ENCODE3			9345
chris-burge:RBM24_est_binding_frac.5mers.txt	ENCFF145YVB	file_library-fraction	RNA Bind-n-Seq	RBM24		Yes	Released	2022-07-14	ENCODE3			9346
chris-burge:RBM24_est_binding_frac.6mers.txt	ENCFF262TWQ	file_library-fraction	RNA Bind-n-Seq	RBM24		Yes	Released	2022-07-14	ENCODE3			9347
chris-burge:RBM24_est_binding_frac.7mers.txt	ENCFF188LGM	file_library-fraction	RNA Bind-n-Seq	RBM24		Yes	Released	2022-07-14	ENCODE3			9348

File Information

file_name	file_format	output_type	assay_type	lab	derived_from	controlled_by	Project	Note
RBM24_5mer_seqlogos.png	png	document	RNA Bind-n-Seq	Burge Lab			ENCODE4
RBM24.logo.png	png	document	RNA Bind-n-Seq	Burge Lab			ENCODE3
RBM24_1300.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		RBM6_input.fastq.gz	ENCODE3
RBM24_20.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		RBM6_input.fastq.gz	ENCODE3
RBM24_320.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		RBM6_input.fastq.gz	ENCODE3
RBM24_5.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		RBM6_input.fastq.gz	ENCODE3
RBM24_80.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		RBM6_input.fastq.gz	ENCODE3
RBM24_input.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab			ENCODE3
RBM24_enrichment_R.4mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	RBM24_1300.fastq.gz,RBM24_20.fastq.gz,RBM24_320.fastq.gz,RBM24_5.fastq.gz,RBM24_80.fastq.gz,RBM6_input.fastq.gz		ENCODE3
RBM24_est_binding_frac.4mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	RBM24_1300.fastq.gz,RBM24_20.fastq.gz,RBM24_320.fastq.gz,RBM24_5.fastq.gz,RBM24_80.fastq.gz,RBM6_input.fastq.gz		ENCODE3
RBM24_enrichment_R.5mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	RBM24_1300.fastq.gz,RBM24_20.fastq.gz,RBM24_320.fastq.gz,RBM24_5.fastq.gz,RBM24_80.fastq.gz,RBM6_input.fastq.gz		ENCODE3
RBM24_est_binding_frac.5mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	RBM24_1300.fastq.gz,RBM24_20.fastq.gz,RBM24_320.fastq.gz,RBM24_5.fastq.gz,RBM24_80.fastq.gz,RBM6_input.fastq.gz		ENCODE3
RBM24_enrichment_R.6mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	RBM24_1300.fastq.gz,RBM24_20.fastq.gz,RBM24_320.fastq.gz,RBM24_5.fastq.gz,RBM24_80.fastq.gz,RBM6_input.fastq.gz		ENCODE3
RBM24_est_binding_frac.6mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	RBM24_1300.fastq.gz,RBM24_20.fastq.gz,RBM24_320.fastq.gz,RBM24_5.fastq.gz,RBM24_80.fastq.gz,RBM6_input.fastq.gz		ENCODE3
RBM24_enrichment_R.7mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	RBM24_1300.fastq.gz,RBM24_20.fastq.gz,RBM24_320.fastq.gz,RBM24_5.fastq.gz,RBM24_80.fastq.gz,RBM6_input.fastq.gz		ENCODE3
RBM24_est_binding_frac.7mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	RBM24_1300.fastq.gz,RBM24_20.fastq.gz,RBM24_320.fastq.gz,RBM24_5.fastq.gz,RBM24_80.fastq.gz,RBM6_input.fastq.gz		ENCODE3