Experiment Information (Status: Released)

RBP	NSUN2
gene_aliases
Status	Released
Status_date	2020-12-07
Project	ENCODE4
Note
ID	6

Motif Logo

Sample Information

Sample_Name	Sample_Type	Read_size_range	rbns_protein_concentration	FILE_ID
NSUN2-1300	RBNS	20-20	1300	NSUN2_1300.fastq.gz
NSUN2-5	RBNS	20-20	5	NSUN2_5.fastq.gz
NSUN2-80	RBNS	20-20	80	NSUN2_80.fastq.gz
NSUN2-input	CN	20-20	0	NSUN2_input.fastq.gz

Data Submission Information

ENCODE_alias	ENCODE_accession	object_type	assay_type	Sample_ID	SAMPLENAMEID	Selected	Status	Status_Date	Project	protocol_folder	protocol_file_name	ID
chris-burge:NSUN2_ZC3H10-input-cntl	ENCSR879LDT	experiment	RNA Bind-n-Seq	NSUN2	ACO1-BGKcLV11-4	Yes	Released	2020-11-23	ENCODE4			1719
chris-burge:NSUN2	ENCSR387CDD	experiment	RNA Bind-n-Seq	NSUN2	NT-BGKcLV11-1	Yes	Released	2020-11-23	ENCODE4			1720
chris-burge:lib-NSUN2-1300	ENCLB921JVX	library	RNA Bind-n-Seq	NSUN2	NT-BGKcLV11-1	Yes	Released	2020-11-23	ENCODE4			1747
chris-burge:lib-NSUN2-5	ENCLB798LDT	library	RNA Bind-n-Seq	NSUN2	NT-BGKcLV11-2	Yes	Released	2020-11-23	ENCODE4			1748
chris-burge:lib-NSUN2-80	ENCLB481YPW	library	RNA Bind-n-Seq	NSUN2	ACO1-BGKcLV11-3	Yes	Released	2020-11-23	ENCODE4			1749
chris-burge:lib-NSUN2-input	ENCLB200KXP	library	RNA Bind-n-Seq	NSUN2	ACO1-BGKcLV11-4	Yes	Released	2020-11-23	ENCODE4			1750
chris-burge:NSUN2_input.fastq.gz	ENCFF934REI	file_fastq	RNA Bind-n-Seq	NSUN2	ACO1-BGKcLV11-4	Yes	Released	2020-11-23	ENCODE4			1778
chris-burge:NSUN2_1300.fastq.gz	ENCFF399SZJ	file_fastq	RNA Bind-n-Seq	NSUN2	NT-BGKcLV11-1	Yes	Released	2020-11-23	ENCODE4			1798
chris-burge:NSUN2_5.fastq.gz	ENCFF106PAT	file_fastq	RNA Bind-n-Seq	NSUN2	NT-BGKcLV11-2	Yes	Released	2020-11-23	ENCODE4			1799
chris-burge:NSUN2_80.fastq.gz	ENCFF436MVF	file_fastq	RNA Bind-n-Seq	NSUN2	ACO1-BGKcLV11-3	Yes	Released	2020-11-23	ENCODE4			1800
chris-burge:NSUN2_6mer_logo0.PWM.txt	ENCFF841VGA	file_pwm	RNA Bind-n-Seq	NSUN2	NT-BGKcLV11-1	Yes	Released	2020-11-23	ENCODE4			1852
chris-burge:NSUN2_6mer_logo1.PWM.txt	ENCFF716XQB	file_pwm	RNA Bind-n-Seq	NSUN2	NT-BGKcLV11-1	Yes	Released	2020-11-23	ENCODE4			1853
chris-burge:NSUN2_6mer_logo2.PWM.txt	ENCFF214AFK	file_pwm	RNA Bind-n-Seq	NSUN2	NT-BGKcLV11-1	Yes	Released	2020-11-23	ENCODE4			1854
chris-burge:NSUN2_enrichment_R.4mers.txt	ENCFF498WEB	file_enrichment	RNA Bind-n-Seq	NSUN2	NT-BGKcLV11-1	Yes	Released	2020-11-23	ENCODE4			1855
chris-burge:NSUN2_enrichment_R.5mers.txt	ENCFF345UKY	file_enrichment	RNA Bind-n-Seq	NSUN2	NT-BGKcLV11-1	Yes	Released	2020-11-23	ENCODE4			1856
chris-burge:NSUN2_enrichment_R.6mers.txt	ENCFF991XEB	file_enrichment	RNA Bind-n-Seq	NSUN2	NT-BGKcLV11-1	Yes	Released	2020-11-23	ENCODE4			1857

File Information

file_name	file_format	output_type	assay_type	lab	derived_from	controlled_by	Project	Note
NSUN2_1300.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		NSUN2_input.fastq.gz	ENCODE4
NSUN2_5.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		NSUN2_input.fastq.gz	ENCODE4
NSUN2_80.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		NSUN2_input.fastq.gz	ENCODE4
NSUN2_input.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab			ENCODE4
NSUN2_6mer_logo0.PWM.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	NSUN2_1300.fastq.gz,NSUN2_5.fastq.gz,NSUN2_80.fastq.gz,NSUN2_input.fastq.gz		ENCODE4
NSUN2_6mer_logo1.PWM.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	NSUN2_1300.fastq.gz,NSUN2_5.fastq.gz,NSUN2_80.fastq.gz,NSUN2_input.fastq.gz		ENCODE4
NSUN2_6mer_logo2.PWM.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	NSUN2_1300.fastq.gz,NSUN2_5.fastq.gz,NSUN2_80.fastq.gz,NSUN2_input.fastq.gz		ENCODE4
NSUN2_6mer_logo3.PWM.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	NSUN2_1300.fastq.gz,NSUN2_5.fastq.gz,NSUN2_80.fastq.gz,NSUN2_input.fastq.gz		ENCODE4
NSUN2_enrichment_R.4mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	NSUN2_1300.fastq.gz,NSUN2_5.fastq.gz,NSUN2_80.fastq.gz,NSUN2_input.fastq.gz		ENCODE4
NSUN2_enrichment_R.5mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	NSUN2_1300.fastq.gz,NSUN2_5.fastq.gz,NSUN2_80.fastq.gz,NSUN2_input.fastq.gz		ENCODE4
NSUN2_enrichment_R.6mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	NSUN2_1300.fastq.gz,NSUN2_5.fastq.gz,NSUN2_80.fastq.gz,NSUN2_input.fastq.gz		ENCODE4
NSUN2_6mer_seqlogos.png	png	document	RNA Bind-n-Seq	Burge Lab			ENCODE4
NSUN2.png	png	document	RNA Bind-n-Seq	Burge Lab			ENCODE4