ENCORE RBNS:ILF2

ILF2 RNA Bind-n-Seq

Experiment Information (Status: Released)


RBP	ILF2
gene_aliases
Status	Released
Status_date	2022-07-15
Project	ENCODE3
Note
ID	48

Motif Logo

Sample Information

Sample_Name	Sample_Type	Read_size_range	rbns_protein_concentration	FILE_ID
ILF2-1300	RBNS	20-20	1300	ILF2_1300.fastq.gz
ILF2-20	RBNS	20-20	20	ILF2_20.fastq.gz
ILF2-320	RBNS	20-20	320	ILF2_320.fastq.gz
ILF2-5	RBNS	20-20	5	ILF2_5.fastq.gz
ILF2-80	RBNS	20-20	80	ILF2_80.fastq.gz
ILF2-input	CN	20-20	0	ILF2_input.fastq.gz

Data Submission Information

ENCODE_alias	ENCODE_accession	object_type	assay_type	Sample_ID	SAMPLENAMEID	Selected	Status	Status_Date	Project	protocol_folder	protocol_file_name	ID
chris-burge:ILF2	ENCSR906EKN	experiment	RNA Bind-n-Seq	ILF2		Yes	Released	2022-07-12	ENCODE3			8046
chris-burge:lib-ILF2-1	ENCLB431EHT	library	RNA Bind-n-Seq	ILF2		Yes	Released	2022-07-12	ENCODE3			8304
chris-burge:lib-ILF2-2	ENCLB907QDG	library	RNA Bind-n-Seq	ILF2		Yes	Released	2022-07-12	ENCODE3			8305
chris-burge:lib-ILF2-3	ENCLB882UDP	library	RNA Bind-n-Seq	ILF2		Yes	Released	2022-07-12	ENCODE3			8306
chris-burge:lib-ILF2-4	ENCLB751TEJ	library	RNA Bind-n-Seq	ILF2		Yes	Released	2022-07-12	ENCODE3			8307
chris-burge:lib-ILF2-5	ENCLB282QEN	library	RNA Bind-n-Seq	ILF2		Yes	Released	2022-07-12	ENCODE3			8308
chris-burge:ILF2_1300.fastq.gz	ENCFF539DBG	file_fastq	RNA Bind-n-Seq	ILF2		Yes	Released	2022-07-14	ENCODE3			8741
chris-burge:ILF2_20.fastq.gz	ENCFF003OLV	file_fastq	RNA Bind-n-Seq	ILF2		Yes	Released	2022-07-14	ENCODE3			8742
chris-burge:ILF2_320.fastq.gz	ENCFF096YGY	file_fastq	RNA Bind-n-Seq	ILF2		Yes	Released	2022-07-14	ENCODE3			8743
chris-burge:ILF2_5.fastq.gz	ENCFF647LEW	file_fastq	RNA Bind-n-Seq	ILF2		Yes	Released	2022-07-14	ENCODE3			8744
chris-burge:ILF2_80.fastq.gz	ENCFF383QAM	file_fastq	RNA Bind-n-Seq	ILF2		Yes	Released	2022-07-14	ENCODE3			8745
chris-burge:ILF2_enrichment_R.4mers.txt	ENCFF085TLW	file_enrichment	RNA Bind-n-Seq	ILF2		Yes	Released	2022-07-14	ENCODE3			9187
chris-burge:ILF2_enrichment_R.5mers.txt	ENCFF612KES	file_enrichment	RNA Bind-n-Seq	ILF2		Yes	Released	2022-07-14	ENCODE3			9188
chris-burge:ILF2_enrichment_R.6mers.txt	ENCFF056ZFM	file_enrichment	RNA Bind-n-Seq	ILF2		Yes	Released	2022-07-14	ENCODE3			9189
chris-burge:ILF2_enrichment_R.7mers.txt	ENCFF971PUI	file_enrichment	RNA Bind-n-Seq	ILF2		Yes	Released	2022-07-14	ENCODE3			9190
chris-burge:ILF2_est_binding_frac.4mers.txt	ENCFF529SPJ	file_library-fraction	RNA Bind-n-Seq	ILF2		Yes	Released	2022-07-14	ENCODE3			9191
chris-burge:ILF2_est_binding_frac.5mers.txt	ENCFF976DUC	file_library-fraction	RNA Bind-n-Seq	ILF2		Yes	Released	2022-07-14	ENCODE3			9192
chris-burge:ILF2_est_binding_frac.6mers.txt	ENCFF254FHX	file_library-fraction	RNA Bind-n-Seq	ILF2		Yes	Released	2022-07-14	ENCODE3			9193
chris-burge:ILF2_est_binding_frac.7mers.txt	ENCFF411LNZ	file_library-fraction	RNA Bind-n-Seq	ILF2		Yes	Released	2022-07-14	ENCODE3			9194

File Information

file_name	file_format	output_type	assay_type	lab	derived_from	controlled_by	Project	Note
ILF2.logo.png	png	document	RNA Bind-n-Seq	Burge Lab			ENCODE3
ILF2_1300.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		RBM25_input.fastq.gz	ENCODE3
ILF2_20.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		RBM25_input.fastq.gz	ENCODE3
ILF2_320.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		RBM25_input.fastq.gz	ENCODE3
ILF2_5.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		RBM25_input.fastq.gz	ENCODE3
ILF2_80.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		RBM25_input.fastq.gz	ENCODE3
ILF2_input.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab			ENCODE3
ILF2_enrichment_R.4mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	ILF2_1300.fastq.gz,ILF2_20.fastq.gz,ILF2_320.fastq.gz,ILF2_5.fastq.gz,ILF2_80.fastq.gz,RBM25_input.fastq.gz		ENCODE3
ILF2_est_binding_frac.4mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	ILF2_1300.fastq.gz,ILF2_20.fastq.gz,ILF2_320.fastq.gz,ILF2_5.fastq.gz,ILF2_80.fastq.gz,RBM25_input.fastq.gz		ENCODE3
ILF2_enrichment_R.5mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	ILF2_1300.fastq.gz,ILF2_20.fastq.gz,ILF2_320.fastq.gz,ILF2_5.fastq.gz,ILF2_80.fastq.gz,RBM25_input.fastq.gz		ENCODE3
ILF2_est_binding_frac.5mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	ILF2_1300.fastq.gz,ILF2_20.fastq.gz,ILF2_320.fastq.gz,ILF2_5.fastq.gz,ILF2_80.fastq.gz,RBM25_input.fastq.gz		ENCODE3
ILF2_enrichment_R.6mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	ILF2_1300.fastq.gz,ILF2_20.fastq.gz,ILF2_320.fastq.gz,ILF2_5.fastq.gz,ILF2_80.fastq.gz,RBM25_input.fastq.gz		ENCODE3
ILF2_est_binding_frac.6mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	ILF2_1300.fastq.gz,ILF2_20.fastq.gz,ILF2_320.fastq.gz,ILF2_5.fastq.gz,ILF2_80.fastq.gz,RBM25_input.fastq.gz		ENCODE3
ILF2_enrichment_R.7mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	ILF2_1300.fastq.gz,ILF2_20.fastq.gz,ILF2_320.fastq.gz,ILF2_5.fastq.gz,ILF2_80.fastq.gz,RBM25_input.fastq.gz		ENCODE3
ILF2_est_binding_frac.7mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	ILF2_1300.fastq.gz,ILF2_20.fastq.gz,ILF2_320.fastq.gz,ILF2_5.fastq.gz,ILF2_80.fastq.gz,RBM25_input.fastq.gz		ENCODE3