Experiment Information (Status: Released)

RBP	IGF2BP3
gene_aliases
Status	Released
Status_date	2020-11-23
Project	ENCODE4
Note
ID	19

Motif Logo

Sample Information

Sample_Name	Sample_Type	Read_size_range	rbns_protein_concentration	FILE_ID
IGF2BP3-20	RBNS	20-20	20	IGF2BP3_20.fastq.gz
IGF2BP3-320	RBNS	20-20	320	IGF2BP3_320.fastq.gz
IGF2BP3-80	RBNS	20-20	80	IGF2BP3_80.fastq.gz
IGF2BP3-input	CN	20-20	0	IGF2BP3_input.fastq.gz

Data Submission Information

ENCODE_alias	ENCODE_accession	object_type	assay_type	Sample_ID	SAMPLENAMEID	Selected	Status	Status_Date	Project	protocol_folder	protocol_file_name	ID
chris-burge:IGF2BP3-input-cntl	ENCSR619AIJ	experiment	RNA Bind-n-Seq	IGF2BP3	PSMA1-BGKcLV13-62	Yes	Released	2020-11-23	ENCODE4			1901
chris-burge:IGF2BP3	ENCSR164XGH	experiment	RNA Bind-n-Seq	IGF2BP3	POLR2A-BGKcLV13-58	Yes	Released	2020-11-23	ENCODE4			1902
chris-burge:lib-IGF2BP3-1	ENCLB108LMB	library	RNA Bind-n-Seq	IGF2BP3	POLR2A-BGKcLV13-57	Yes	Released	2020-11-23	ENCODE4			1925
chris-burge:lib-IGF2BP3-2	ENCLB263RTK	library	RNA Bind-n-Seq	IGF2BP3	POLR2A-BGKcLV13-58	Yes	Released	2020-11-23	ENCODE4			1926
chris-burge:lib-IGF2BP3-3	ENCLB662OQW	library	RNA Bind-n-Seq	IGF2BP3	PSMA1-BGKcLV13-61	Yes	Released	2020-11-23	ENCODE4			1927
chris-burge:lib-IGF2BP3-input-cntl	ENCLB692KCW	library	RNA Bind-n-Seq	IGF2BP3	PSMA1-BGKcLV13-62	Yes	Released	2020-11-23	ENCODE4			1928
chris-burge:IGF2BP3_20.fastq.gz	ENCFF560UQP	file_fastq	RNA Bind-n-Seq	IGF2BP3	POLR2A-BGKcLV13-57	Yes	Released	2020-11-23	ENCODE4			1966
chris-burge:IGF2BP3_320.fastq.gz	ENCFF066XQG	file_fastq	RNA Bind-n-Seq	IGF2BP3	POLR2A-BGKcLV13-58	Yes	Released	2020-11-23	ENCODE4			1967
chris-burge:IGF2BP3_input.fastq.gz	ENCFF175MMH	file_fastq	RNA Bind-n-Seq	IGF2BP3	PSMA1-BGKcLV13-62	Yes	Released	2020-11-23	ENCODE4			1968
chris-burge:IGF2BP3_80.fastq.gz	ENCFF935OTT	file_fastq	RNA Bind-n-Seq	IGF2BP3	PSMA1-BGKcLV13-61	Yes	Released	2020-11-23	ENCODE4			1997
chris-burge:IGF2BP3_5mer_logo0.PWM	ENCFF663TKD	file_pwm	RNA Bind-n-Seq	IGF2BP3	POLR2A-BGKcLV13-58	Yes	Released	2020-11-23	ENCODE4			2037
chris-burge:IGF2BP3_6mer_logo0.PWM	ENCFF539YEC	file_pwm	RNA Bind-n-Seq	IGF2BP3	POLR2A-BGKcLV13-58	Yes	Released	2020-11-23	ENCODE4			2038
chris-burge:IGF2BP3_7mer_logo0.PWM	ENCFF429BTX	file_pwm	RNA Bind-n-Seq	IGF2BP3	POLR2A-BGKcLV13-58	Yes	Released	2020-11-23	ENCODE4			2039
chris-burge:IGF2BP3_7mer_logo1.PWM	ENCFF404ZYD	file_pwm	RNA Bind-n-Seq	IGF2BP3	POLR2A-BGKcLV13-58	Yes	Released	2020-11-23	ENCODE4			2040
chris-burge:IGF2BP3_7mer_logo2.PWM	ENCFF411PVM	file_pwm	RNA Bind-n-Seq	IGF2BP3	POLR2A-BGKcLV13-58	Yes	Released	2020-11-23	ENCODE4			2041
chris-burge:IGF2BP3_8mer_logo0.PWM	ENCFF370SOC	file_pwm	RNA Bind-n-Seq	IGF2BP3	POLR2A-BGKcLV13-58	Yes	Released	2020-11-23	ENCODE4			2042
chris-burge:IGF2BP3_8mer_logo1.PWM	ENCFF449XDM	file_pwm	RNA Bind-n-Seq	IGF2BP3	POLR2A-BGKcLV13-58	Yes	Released	2020-11-23	ENCODE4			2043
chris-burge:IGF2BP3_enrichment_R.4mers.mark_adapters.txt	ENCFF365IVW	file_enrichment	RNA Bind-n-Seq	IGF2BP3	POLR2A-BGKcLV13-58	Yes	Released	2020-11-23	ENCODE4			2074
chris-burge:IGF2BP3_enrichment_R.5mers.mark_adapters.txt	ENCFF044AFX	file_enrichment	RNA Bind-n-Seq	IGF2BP3	POLR2A-BGKcLV13-58	Yes	Released	2020-11-23	ENCODE4			2075
chris-burge:IGF2BP3_enrichment_R.6mers.mark_adapters.txt	ENCFF241KWN	file_enrichment	RNA Bind-n-Seq	IGF2BP3	POLR2A-BGKcLV13-58	Yes	Released	2020-11-23	ENCODE4			2076
chris-burge:IGF2BP3_enrichment_R.7mers.mark_adapters.txt	ENCFF449FBS	file_enrichment	RNA Bind-n-Seq	IGF2BP3	POLR2A-BGKcLV13-58	Yes	Released	2020-11-23	ENCODE4			2077
chris-burge:IGF2BP3_enrichment_R.8mers.mark_adapters.txt	ENCFF122TZZ	file_enrichment	RNA Bind-n-Seq	IGF2BP3	POLR2A-BGKcLV13-58	Yes	Released	2020-11-23	ENCODE4			2078
chris-burge:IGF2BP3_enrichment_R.9mers.mark_adapters.txt	ENCFF272TNA	file_enrichment	RNA Bind-n-Seq	IGF2BP3	POLR2A-BGKcLV13-58	Yes	Released	2020-11-23	ENCODE4			2079

File Information

file_name	file_format	output_type	assay_type	lab	derived_from	controlled_by	Project	Note
IGF2BP3_20.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		IGF2BP3_input.fastq.gz	ENCODE4
IGF2BP3_320.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		IGF2BP3_input.fastq.gz	ENCODE4
IGF2BP3_80.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		IGF2BP3_input.fastq.gz	ENCODE4
IGF2BP3_input.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab			ENCODE4
IGF2BP3_5mer_logo0.PWM	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	IGF2BP3_20.fastq.gz,IGF2BP3_320.fastq.gz,IGF2BP3_80.fastq.gz,IGF2BP3_input.fastq.gz		ENCODE4
IGF2BP3_6mer_logo0.PWM	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	IGF2BP3_20.fastq.gz,IGF2BP3_320.fastq.gz,IGF2BP3_80.fastq.gz,IGF2BP3_input.fastq.gz		ENCODE4
IGF2BP3_7mer_logo0.PWM	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	IGF2BP3_20.fastq.gz,IGF2BP3_320.fastq.gz,IGF2BP3_80.fastq.gz,IGF2BP3_input.fastq.gz		ENCODE4
IGF2BP3_7mer_logo1.PWM	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	IGF2BP3_20.fastq.gz,IGF2BP3_320.fastq.gz,IGF2BP3_80.fastq.gz,IGF2BP3_input.fastq.gz		ENCODE4
IGF2BP3_7mer_logo2.PWM	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	IGF2BP3_20.fastq.gz,IGF2BP3_320.fastq.gz,IGF2BP3_80.fastq.gz,IGF2BP3_input.fastq.gz		ENCODE4
IGF2BP3_8mer_logo0.PWM	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	IGF2BP3_20.fastq.gz,IGF2BP3_320.fastq.gz,IGF2BP3_80.fastq.gz,IGF2BP3_input.fastq.gz		ENCODE4
IGF2BP3_8mer_logo1.PWM	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	IGF2BP3_20.fastq.gz,IGF2BP3_320.fastq.gz,IGF2BP3_80.fastq.gz,IGF2BP3_input.fastq.gz		ENCODE4
IGF2BP3_enrichment_R.4mers.mark_adapters.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	IGF2BP3_20.fastq.gz,IGF2BP3_320.fastq.gz,IGF2BP3_80.fastq.gz,IGF2BP3_input.fastq.gz		ENCODE4
IGF2BP3_enrichment_R.5mers.mark_adapters.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	IGF2BP3_20.fastq.gz,IGF2BP3_320.fastq.gz,IGF2BP3_80.fastq.gz,IGF2BP3_input.fastq.gz		ENCODE4
IGF2BP3_enrichment_R.6mers.mark_adapters.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	IGF2BP3_20.fastq.gz,IGF2BP3_320.fastq.gz,IGF2BP3_80.fastq.gz,IGF2BP3_input.fastq.gz		ENCODE4
IGF2BP3_enrichment_R.7mers.mark_adapters.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	IGF2BP3_20.fastq.gz,IGF2BP3_320.fastq.gz,IGF2BP3_80.fastq.gz,IGF2BP3_input.fastq.gz		ENCODE4
IGF2BP3_enrichment_R.8mers.mark_adapters.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	IGF2BP3_20.fastq.gz,IGF2BP3_320.fastq.gz,IGF2BP3_80.fastq.gz,IGF2BP3_input.fastq.gz		ENCODE4
IGF2BP3_enrichment_R.9mers.mark_adapters.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	IGF2BP3_20.fastq.gz,IGF2BP3_320.fastq.gz,IGF2BP3_80.fastq.gz,IGF2BP3_input.fastq.gz		ENCODE4
IGF2BP3_5mer_seqlogos.png	png	document	RNA Bind-n-Seq	Burge Lab			ENCODE4
IGF2BP3_6mer_seqlogos.png	png	document	RNA Bind-n-Seq	Burge Lab			ENCODE4
IGF2BP3_7mer_seqlogos.png	png	document	RNA Bind-n-Seq	Burge Lab			ENCODE4
IGF2BP3_8mer_seqlogos.png	png	document	RNA Bind-n-Seq	Burge Lab			ENCODE4
IGF2BP3_coomassie.pdf	pdf	document	RNA Bind-n-Seq	Burge Lab			ENCODE4