Experiment Information (Status: Released)

RBP	IGF2BP2
gene_aliases
Status	Released
Status_date	2022-07-15
Project	ENCODE3
Note
ID	77

Motif Logo

Sample Information

Sample_Name	Sample_Type	Read_size_range	rbns_protein_concentration	FILE_ID
IGF2BP2-mockPD	CN	20-20	0	IGF2BP2_0.fastq.gz
IGF2BP2-1300	RBNS	20-20	1300	IGF2BP2_1300.fastq.gz
IGF2BP2-20	RBNS	20-20	20	IGF2BP2_20.fastq.gz
IGF2BP2-320	RBNS	20-20	320	IGF2BP2_320.fastq.gz
IGF2BP2-5	RBNS	20-20	5	IGF2BP2_5.fastq.gz
IGF2BP2-80	RBNS	20-20	80	IGF2BP2_80.fastq.gz
IGF2BP2-input	CN	20-20	0	IGF2BP2_input.fastq.gz

Data Submission Information

ENCODE_alias	ENCODE_accession	object_type	assay_type	Sample_ID	SAMPLENAMEID	Selected	Status	Status_Date	Project	protocol_folder	protocol_file_name	ID
chris-burge:IGF2BP2	ENCSR588GYZ	experiment	RNA Bind-n-Seq	IGF2BP2		Yes	Released	2022-07-12	ENCODE3			8043
chris-burge:IGF2BP2-input-cntl	ENCSR697KPL	experiment	RNA Bind-n-Seq	IGF2BP2		Yes	Released	2022-07-12	ENCODE3			8044
chris-burge:IGF2BP2-mockPD-cntl	ENCSR845RKH	experiment	RNA Bind-n-Seq	IGF2BP2		Yes	Released	2022-07-12	ENCODE3			8045
chris-burge:lib-IGF2BP2-1	ENCLB549QWK	library	RNA Bind-n-Seq	IGF2BP2		Yes	Released	2022-07-12	ENCODE3			8297
chris-burge:lib-IGF2BP2-2	ENCLB921RRQ	library	RNA Bind-n-Seq	IGF2BP2		Yes	Released	2022-07-12	ENCODE3			8298
chris-burge:lib-IGF2BP2-3	ENCLB279DSZ	library	RNA Bind-n-Seq	IGF2BP2		Yes	Released	2022-07-12	ENCODE3			8299
chris-burge:lib-IGF2BP2-4	ENCLB481XSE	library	RNA Bind-n-Seq	IGF2BP2		Yes	Released	2022-07-12	ENCODE3			8300
chris-burge:lib-IGF2BP2-5	ENCLB844WVY	library	RNA Bind-n-Seq	IGF2BP2		Yes	Released	2022-07-12	ENCODE3			8301
chris-burge:lib-IGF2BP2-input-cntl	ENCLB391QMU	library	RNA Bind-n-Seq	IGF2BP2		Yes	Released	2022-07-12	ENCODE3			8302
chris-burge:lib-IGF2BP2-mockPD-cntl	ENCLB724PZY	library	RNA Bind-n-Seq	IGF2BP2		Yes	Released	2022-07-12	ENCODE3			8303
chris-burge:IGF2BP2_0.fastq.gz	ENCFF032AUY	file_fastq	RNA Bind-n-Seq	IGF2BP2		Yes	Released	2022-07-14	ENCODE3			8734
chris-burge:IGF2BP2_1300.fastq.gz	ENCFF331ENP	file_fastq	RNA Bind-n-Seq	IGF2BP2		Yes	Released	2022-07-14	ENCODE3			8735
chris-burge:IGF2BP2_20.fastq.gz	ENCFF998ZLV	file_fastq	RNA Bind-n-Seq	IGF2BP2		Yes	Released	2022-07-14	ENCODE3			8736
chris-burge:IGF2BP2_320.fastq.gz	ENCFF833VXY	file_fastq	RNA Bind-n-Seq	IGF2BP2		Yes	Released	2022-07-14	ENCODE3			8737
chris-burge:IGF2BP2_5.fastq.gz	ENCFF074RIC	file_fastq	RNA Bind-n-Seq	IGF2BP2		Yes	Released	2022-07-14	ENCODE3			8738
chris-burge:IGF2BP2_80.fastq.gz	ENCFF758QOA	file_fastq	RNA Bind-n-Seq	IGF2BP2		Yes	Released	2022-07-14	ENCODE3			8739
chris-burge:IGF2BP2_input.fastq.gz	ENCFF917XEN	file_fastq	RNA Bind-n-Seq	IGF2BP2		Yes	Released	2022-07-14	ENCODE3			8740
chris-burge:IGF2BP2_enrichment_R.5mers.txt	ENCFF446BRC	file_enrichment	RNA Bind-n-Seq	IGF2BP2		Yes	Released	2022-07-14	ENCODE3			9181
chris-burge:IGF2BP2_enrichment_R.6mers.txt	ENCFF359JRV	file_enrichment	RNA Bind-n-Seq	IGF2BP2		Yes	Released	2022-07-14	ENCODE3			9182
chris-burge:IGF2BP2_enrichment_R.7mers.txt	ENCFF841MFA	file_enrichment	RNA Bind-n-Seq	IGF2BP2		Yes	Released	2022-07-14	ENCODE3			9183
chris-burge:IGF2BP2_est_binding_frac.5mers.ordered_by_enrichment.txt	ENCFF703PSX	file_library-fraction	RNA Bind-n-Seq	IGF2BP2		Yes	Released	2022-07-14	ENCODE3			9184
chris-burge:IGF2BP2_est_binding_frac.6mers.ordered_by_enrichment.txt	ENCFF551GUG	file_library-fraction	RNA Bind-n-Seq	IGF2BP2		Yes	Released	2022-07-14	ENCODE3			9185
chris-burge:IGF2BP2_est_binding_frac.7mers.ordered_by_enrichment.txt	ENCFF262EYJ	file_library-fraction	RNA Bind-n-Seq	IGF2BP2		Yes	Released	2022-07-14	ENCODE3			9186
chris-burge:K562.with_motif.IGF2BP2.bed.gz	ENCFF556SJQ	file_bed	RNA Bind-n-Seq	IGF2BP2		Yes	Released	2022-07-14	ENCODE3			9728

File Information

file_name	file_format	output_type	assay_type	lab	derived_from	controlled_by	Project	Note
IGF2BP2.logo.png	png	document	RNA Bind-n-Seq	Burge Lab			ENCODE3
IGF2BP2_0.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab			ENCODE3
IGF2BP2_1300.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		IGF2BP2_0.fastq.gz,IGF2BP2_input.fastq.gz	ENCODE3
IGF2BP2_20.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		IGF2BP2_0.fastq.gz,IGF2BP2_input.fastq.gz	ENCODE3
IGF2BP2_320.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		IGF2BP2_0.fastq.gz,IGF2BP2_input.fastq.gz	ENCODE3
IGF2BP2_5.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		IGF2BP2_0.fastq.gz,IGF2BP2_input.fastq.gz	ENCODE3
IGF2BP2_80.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		IGF2BP2_0.fastq.gz,IGF2BP2_input.fastq.gz	ENCODE3
IGF2BP2_input.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab			ENCODE3
IGF2BP2_enrichment_R.5mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	IGF2BP2_0.fastq.gz,IGF2BP2_1300.fastq.gz,IGF2BP2_20.fastq.gz,IGF2BP2_320.fastq.gz,IGF2BP2_5.fastq.gz,IGF2BP2_80.fastq.gz,IGF2BP2_input.fastq.gz		ENCODE3
IGF2BP2_est_binding_frac.5mers.ordered_by_enrichment.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	IGF2BP2_0.fastq.gz,IGF2BP2_1300.fastq.gz,IGF2BP2_20.fastq.gz,IGF2BP2_320.fastq.gz,IGF2BP2_5.fastq.gz,IGF2BP2_80.fastq.gz,IGF2BP2_input.fastq.gz		ENCODE3
IGF2BP2_enrichment_R.6mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	IGF2BP2_0.fastq.gz,IGF2BP2_1300.fastq.gz,IGF2BP2_20.fastq.gz,IGF2BP2_320.fastq.gz,IGF2BP2_5.fastq.gz,IGF2BP2_80.fastq.gz,IGF2BP2_input.fastq.gz		ENCODE3
IGF2BP2_est_binding_frac.6mers.ordered_by_enrichment.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	IGF2BP2_0.fastq.gz,IGF2BP2_1300.fastq.gz,IGF2BP2_20.fastq.gz,IGF2BP2_320.fastq.gz,IGF2BP2_5.fastq.gz,IGF2BP2_80.fastq.gz,IGF2BP2_input.fastq.gz		ENCODE3
IGF2BP2_enrichment_R.7mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	IGF2BP2_0.fastq.gz,IGF2BP2_1300.fastq.gz,IGF2BP2_20.fastq.gz,IGF2BP2_320.fastq.gz,IGF2BP2_5.fastq.gz,IGF2BP2_80.fastq.gz,IGF2BP2_input.fastq.gz		ENCODE3
IGF2BP2_est_binding_frac.7mers.ordered_by_enrichment.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	IGF2BP2_0.fastq.gz,IGF2BP2_1300.fastq.gz,IGF2BP2_20.fastq.gz,IGF2BP2_320.fastq.gz,IGF2BP2_5.fastq.gz,IGF2BP2_80.fastq.gz,IGF2BP2_input.fastq.gz		ENCODE3
K562.with_motif.IGF2BP2.bed.gz	bed_RBNS	peaks	RNA Bind-n-Seq	Burge Lab	IGF2BP2_enrichment_R.5mers.txt,226.01v02.IDR.out.0102merged.bed.blacklist_removed.bed.narrowPeak.encode.bed.gz		ENCODE3