Experiment Information (Status: Released)

RBP	HNRNPDL
gene_aliases
Status	Released
Status_date	2022-07-15
Project	ENCODE3
Note
ID	100

Motif Logo

Sample Information

Sample_Name	Sample_Type	Read_size_range	rbns_protein_concentration	FILE_ID
HNRNPDL-1300	RBNS	20-20	1300	hnRNPDL_1300.fastq.gz
HNRNPDL-20	RBNS	20-20	20	hnRNPDL_20.fastq.gz
HNRNPDL-320	RBNS	20-20	320	hnRNPDL_320.fastq.gz
HNRNPDL-5	RBNS	20-20	5	hnRNPDL_5.fastq.gz
HNRNPDL-80	RBNS	20-20	80	hnRNPDL_80.fastq.gz
HNRNPDL-input	CN	20-20	0	hnRNPDL_input.fastq.gz

Data Submission Information

ENCODE_alias	ENCODE_accession	object_type	assay_type	Sample_ID	SAMPLENAMEID	Selected	Status	Status_Date	Project	protocol_folder	protocol_file_name	ID
chris-burge:HNRNPDL	ENCSR055HDN	experiment	RNA Bind-n-Seq	HNRNPDL		Yes	Released	2022-07-12	ENCODE3			8029
chris-burge:HNRNPDL-RBM15B-input-cntl	ENCSR599EMY	experiment	RNA Bind-n-Seq	HNRNPDL		Yes	Released	2022-07-12	ENCODE3			8030
chris-burge:lib-HNRNPDL-1	ENCLB482EBK	library	RNA Bind-n-Seq	HNRNPDL		Yes	Released	2022-07-12	ENCODE3			8265
chris-burge:lib-HNRNPDL-2	ENCLB471ATY	library	RNA Bind-n-Seq	HNRNPDL		Yes	Released	2022-07-12	ENCODE3			8266
chris-burge:lib-HNRNPDL-3	ENCLB755HYF	library	RNA Bind-n-Seq	HNRNPDL		Yes	Released	2022-07-12	ENCODE3			8267
chris-burge:lib-HNRNPDL-4	ENCLB037HXN	library	RNA Bind-n-Seq	HNRNPDL		Yes	Released	2022-07-12	ENCODE3			8268
chris-burge:lib-HNRNPDL-5	ENCLB188KGT	library	RNA Bind-n-Seq	HNRNPDL		Yes	Released	2022-07-12	ENCODE3			8269
chris-burge:lib-HNRNPDL-RBM15B-input-cntl	ENCLB425BMX	library	RNA Bind-n-Seq	HNRNPDL		Yes	Released	2022-07-12	ENCODE3			8270
chris-burge:hnRNPDL_1300.fastq.gz	ENCFF032BNE	file_fastq	RNA Bind-n-Seq	HNRNPDL		Yes	Released	2022-07-14	ENCODE3			8717
chris-burge:hnRNPDL_20.fastq.gz	ENCFF495RWY	file_fastq	RNA Bind-n-Seq	HNRNPDL		Yes	Released	2022-07-14	ENCODE3			8718
chris-burge:hnRNPDL_320.fastq.gz	ENCFF566PVD	file_fastq	RNA Bind-n-Seq	HNRNPDL		Yes	Released	2022-07-14	ENCODE3			8719
chris-burge:hnRNPDL_5.fastq.gz	ENCFF694BLE	file_fastq	RNA Bind-n-Seq	HNRNPDL		Yes	Released	2022-07-14	ENCODE3			8720
chris-burge:hnRNPDL_80.fastq.gz	ENCFF613XWY	file_fastq	RNA Bind-n-Seq	HNRNPDL		Yes	Released	2022-07-14	ENCODE3			8721
chris-burge:hnRNPDL_input.fastq.gz	ENCFF969DHV	file_fastq	RNA Bind-n-Seq	HNRNPDL		Yes	Released	2022-07-14	ENCODE3			8722
chris-burge:hnRNPDL_enrichment_R.4mers.txt	ENCFF223UQZ	file_enrichment	RNA Bind-n-Seq	HNRNPDL		Yes	Released	2022-07-14	ENCODE3			9147
chris-burge:hnRNPDL_enrichment_R.5mers.txt	ENCFF074YRT	file_enrichment	RNA Bind-n-Seq	HNRNPDL		Yes	Released	2022-07-14	ENCODE3			9148
chris-burge:hnRNPDL_enrichment_R.6mers.txt	ENCFF973JIY	file_enrichment	RNA Bind-n-Seq	HNRNPDL		Yes	Released	2022-07-14	ENCODE3			9149
chris-burge:hnRNPDL_enrichment_R.7mers.txt	ENCFF554UMM	file_enrichment	RNA Bind-n-Seq	HNRNPDL		Yes	Released	2022-07-14	ENCODE3			9150
chris-burge:hnRNPDL_est_binding_frac.4mers.txt	ENCFF603UTU	file_library-fraction	RNA Bind-n-Seq	HNRNPDL		Yes	Released	2022-07-14	ENCODE3			9151
chris-burge:hnRNPDL_est_binding_frac.5mers.txt	ENCFF683ZMK	file_library-fraction	RNA Bind-n-Seq	HNRNPDL		Yes	Released	2022-07-14	ENCODE3			9152
chris-burge:hnRNPDL_est_binding_frac.6mers.txt	ENCFF194JIU	file_library-fraction	RNA Bind-n-Seq	HNRNPDL		Yes	Released	2022-07-14	ENCODE3			9153
chris-burge:hnRNPDL_est_binding_frac.7mers.txt	ENCFF615HRC	file_library-fraction	RNA Bind-n-Seq	HNRNPDL		Yes	Released	2022-07-14	ENCODE3			9154

File Information

file_name	file_format	output_type	assay_type	lab	derived_from	controlled_by	Project	Note
HNRNPDL.logo.png	png	document	RNA Bind-n-Seq	Burge Lab			ENCODE3
hnRNPDL_1300.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		hnRNPDL_input.fastq.gz	ENCODE3
hnRNPDL_20.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		hnRNPDL_input.fastq.gz	ENCODE3
hnRNPDL_320.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		hnRNPDL_input.fastq.gz	ENCODE3
hnRNPDL_5.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		hnRNPDL_input.fastq.gz	ENCODE3
hnRNPDL_80.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		hnRNPDL_input.fastq.gz	ENCODE3
hnRNPDL_input.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab			ENCODE3
hnRNPDL_enrichment_R.4mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	hnRNPDL_1300.fastq.gz,hnRNPDL_20.fastq.gz,hnRNPDL_320.fastq.gz,hnRNPDL_5.fastq.gz,hnRNPDL_80.fastq.gz,hnRNPDL_input.fastq.gz		ENCODE3
hnRNPDL_est_binding_frac.4mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	hnRNPDL_1300.fastq.gz,hnRNPDL_20.fastq.gz,hnRNPDL_320.fastq.gz,hnRNPDL_5.fastq.gz,hnRNPDL_80.fastq.gz,hnRNPDL_input.fastq.gz		ENCODE3
hnRNPDL_enrichment_R.5mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	hnRNPDL_1300.fastq.gz,hnRNPDL_20.fastq.gz,hnRNPDL_320.fastq.gz,hnRNPDL_5.fastq.gz,hnRNPDL_80.fastq.gz,hnRNPDL_input.fastq.gz		ENCODE3
hnRNPDL_est_binding_frac.5mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	hnRNPDL_1300.fastq.gz,hnRNPDL_20.fastq.gz,hnRNPDL_320.fastq.gz,hnRNPDL_5.fastq.gz,hnRNPDL_80.fastq.gz,hnRNPDL_input.fastq.gz		ENCODE3
hnRNPDL_enrichment_R.6mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	hnRNPDL_1300.fastq.gz,hnRNPDL_20.fastq.gz,hnRNPDL_320.fastq.gz,hnRNPDL_5.fastq.gz,hnRNPDL_80.fastq.gz,hnRNPDL_input.fastq.gz		ENCODE3
hnRNPDL_est_binding_frac.6mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	hnRNPDL_1300.fastq.gz,hnRNPDL_20.fastq.gz,hnRNPDL_320.fastq.gz,hnRNPDL_5.fastq.gz,hnRNPDL_80.fastq.gz,hnRNPDL_input.fastq.gz		ENCODE3
hnRNPDL_enrichment_R.7mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	hnRNPDL_1300.fastq.gz,hnRNPDL_20.fastq.gz,hnRNPDL_320.fastq.gz,hnRNPDL_5.fastq.gz,hnRNPDL_80.fastq.gz,hnRNPDL_input.fastq.gz		ENCODE3
hnRNPDL_est_binding_frac.7mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	hnRNPDL_1300.fastq.gz,hnRNPDL_20.fastq.gz,hnRNPDL_320.fastq.gz,hnRNPDL_5.fastq.gz,hnRNPDL_80.fastq.gz,hnRNPDL_input.fastq.gz		ENCODE3