ENCORE RBNS:HNRNPA0

HNRNPA0 RNA Bind-n-Seq

Experiment Information (Status: Released)


RBP	HNRNPA0
gene_aliases
Status	Released
Status_date	2022-07-15
Project	ENCODE3
Note
ID	96

Motif Logo

Sample Information

Sample_Name	Sample_Type	Read_size_range	rbns_protein_concentration	FILE_ID
HNRNPA0-1300	RBNS	20-20	1300	HNRNPA0_1300.fastq.gz
HNRNPA0-20	RBNS	20-20	20	HNRNPA0_20.fastq.gz
HNRNPA0-320	RBNS	20-20	320	HNRNPA0_320.fastq.gz
HNRNPA0-5	RBNS	20-20	5	HNRNPA0_5.fastq.gz
HNRNPA0-80	RBNS	20-20	80	HNRNPA0_80.fastq.gz
HNRNPA0-input	CN	20-20	0	HNRNPA0_input.fastq.gz

Data Submission Information

ENCODE_alias	ENCODE_accession	object_type	assay_type	Sample_ID	SAMPLENAMEID	Selected	Status	Status_Date	Project	protocol_folder	protocol_file_name	ID
chris-burge:HNRNPA0	ENCSR170PBM	experiment	RNA Bind-n-Seq	HNRNPA0		Yes	Released	2022-07-12	ENCODE3			8019
chris-burge:lib-HNRNPA0-1	ENCLB995VKG	library	RNA Bind-n-Seq	HNRNPA0		Yes	Released	2022-07-12	ENCODE3			8235
chris-burge:lib-HNRNPA0-2	ENCLB605VJD	library	RNA Bind-n-Seq	HNRNPA0		Yes	Released	2022-07-12	ENCODE3			8236
chris-burge:lib-HNRNPA0-3	ENCLB167PRK	library	RNA Bind-n-Seq	HNRNPA0		Yes	Released	2022-07-12	ENCODE3			8237
chris-burge:lib-HNRNPA0-4	ENCLB905WGP	library	RNA Bind-n-Seq	HNRNPA0		Yes	Released	2022-07-12	ENCODE3			8238
chris-burge:lib-HNRNPA0-5	ENCLB204OOQ	library	RNA Bind-n-Seq	HNRNPA0		Yes	Released	2022-07-12	ENCODE3			8239
chris-burge:HNRNPA0_1300.fastq.gz	ENCFF836VGG	file_fastq	RNA Bind-n-Seq	HNRNPA0		Yes	Released	2022-07-14	ENCODE3			8701
chris-burge:HNRNPA0_20.fastq.gz	ENCFF156FZK	file_fastq	RNA Bind-n-Seq	HNRNPA0		Yes	Released	2022-07-14	ENCODE3			8702
chris-burge:HNRNPA0_320.fastq.gz	ENCFF210HCF	file_fastq	RNA Bind-n-Seq	HNRNPA0		Yes	Released	2022-07-14	ENCODE3			8703
chris-burge:HNRNPA0_5.fastq.gz	ENCFF373FBO	file_fastq	RNA Bind-n-Seq	HNRNPA0		Yes	Released	2022-07-14	ENCODE3			8704
chris-burge:HNRNPA0_80.fastq.gz	ENCFF114JMF	file_fastq	RNA Bind-n-Seq	HNRNPA0		Yes	Released	2022-07-14	ENCODE3			8705
chris-burge:HNRNPA0_enrichment_R.4mers.txt	ENCFF372WVS	file_enrichment	RNA Bind-n-Seq	HNRNPA0		Yes	Released	2022-07-14	ENCODE3			9116
chris-burge:HNRNPA0_enrichment_R.5mers.txt	ENCFF626WPP	file_enrichment	RNA Bind-n-Seq	HNRNPA0		Yes	Released	2022-07-14	ENCODE3			9117
chris-burge:HNRNPA0_enrichment_R.6mers.txt	ENCFF541BLM	file_enrichment	RNA Bind-n-Seq	HNRNPA0		Yes	Released	2022-07-14	ENCODE3			9118
chris-burge:HNRNPA0_enrichment_R.7mers.txt	ENCFF314LDN	file_enrichment	RNA Bind-n-Seq	HNRNPA0		Yes	Released	2022-07-14	ENCODE3			9119
chris-burge:HNRNPA0_est_binding_frac.4mers.txt	ENCFF992KEZ	file_library-fraction	RNA Bind-n-Seq	HNRNPA0		Yes	Released	2022-07-14	ENCODE3			9120
chris-burge:HNRNPA0_est_binding_frac.5mers.txt	ENCFF872NAF	file_library-fraction	RNA Bind-n-Seq	HNRNPA0		Yes	Released	2022-07-14	ENCODE3			9121
chris-burge:HNRNPA0_est_binding_frac.6mers.txt	ENCFF243RRA	file_library-fraction	RNA Bind-n-Seq	HNRNPA0		Yes	Released	2022-07-14	ENCODE3			9122
chris-burge:HNRNPA0_est_binding_frac.7mers.txt	ENCFF975HUX	file_library-fraction	RNA Bind-n-Seq	HNRNPA0		Yes	Released	2022-07-14	ENCODE3			9123

File Information

file_name	file_format	output_type	assay_type	lab	derived_from	controlled_by	Project	Note
HNRNPA0.logo.png	png	document	RNA Bind-n-Seq	Burge Lab			ENCODE3
HNRNPA0_1300.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		FUBP3_input.fastq.gz	ENCODE3
HNRNPA0_20.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		FUBP3_input.fastq.gz	ENCODE3
HNRNPA0_320.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		FUBP3_input.fastq.gz	ENCODE3
HNRNPA0_5.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		FUBP3_input.fastq.gz	ENCODE3
HNRNPA0_80.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		FUBP3_input.fastq.gz	ENCODE3
HNRNPA0_input.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab			ENCODE3
HNRNPA0_enrichment_R.4mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	HNRNPA0_1300.fastq.gz,HNRNPA0_20.fastq.gz,HNRNPA0_320.fastq.gz,HNRNPA0_5.fastq.gz,HNRNPA0_80.fastq.gz,FUBP3_input.fastq.gz		ENCODE3
HNRNPA0_est_binding_frac.4mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	HNRNPA0_1300.fastq.gz,HNRNPA0_20.fastq.gz,HNRNPA0_320.fastq.gz,HNRNPA0_5.fastq.gz,HNRNPA0_80.fastq.gz,FUBP3_input.fastq.gz		ENCODE3
HNRNPA0_enrichment_R.5mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	HNRNPA0_1300.fastq.gz,HNRNPA0_20.fastq.gz,HNRNPA0_320.fastq.gz,HNRNPA0_5.fastq.gz,HNRNPA0_80.fastq.gz,FUBP3_input.fastq.gz		ENCODE3
HNRNPA0_est_binding_frac.5mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	HNRNPA0_1300.fastq.gz,HNRNPA0_20.fastq.gz,HNRNPA0_320.fastq.gz,HNRNPA0_5.fastq.gz,HNRNPA0_80.fastq.gz,FUBP3_input.fastq.gz		ENCODE3
HNRNPA0_enrichment_R.6mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	HNRNPA0_1300.fastq.gz,HNRNPA0_20.fastq.gz,HNRNPA0_320.fastq.gz,HNRNPA0_5.fastq.gz,HNRNPA0_80.fastq.gz,FUBP3_input.fastq.gz		ENCODE3
HNRNPA0_est_binding_frac.6mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	HNRNPA0_1300.fastq.gz,HNRNPA0_20.fastq.gz,HNRNPA0_320.fastq.gz,HNRNPA0_5.fastq.gz,HNRNPA0_80.fastq.gz,FUBP3_input.fastq.gz		ENCODE3
HNRNPA0_enrichment_R.7mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	HNRNPA0_1300.fastq.gz,HNRNPA0_20.fastq.gz,HNRNPA0_320.fastq.gz,HNRNPA0_5.fastq.gz,HNRNPA0_80.fastq.gz,FUBP3_input.fastq.gz		ENCODE3
HNRNPA0_est_binding_frac.7mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	HNRNPA0_1300.fastq.gz,HNRNPA0_20.fastq.gz,HNRNPA0_320.fastq.gz,HNRNPA0_5.fastq.gz,HNRNPA0_80.fastq.gz,FUBP3_input.fastq.gz		ENCODE3