Experiment Information (Status: Released)

RBP	EIF4G2
gene_aliases
Status	Released
Status_date	2022-07-15
Project	ENCODE3
Note
ID	62

Motif Logo

Sample Information

Sample_Name	Sample_Type	Read_size_range	rbns_protein_concentration	FILE_ID
EIF4G2-1300	RBNS	20-20	1300	EIF4G2_1300.fastq.gz
EIF4G2-20	RBNS	20-20	20	EIF4G2_20.fastq.gz
EIF4G2-320	RBNS	20-20	320	EIF4G2_320.fastq.gz
EIF4G2-5	RBNS	20-20	5	EIF4G2_5.fastq.gz
EIF4G2-80	RBNS	20-20	80	EIF4G2_80.fastq.gz
EIF4G2-input	CN	20-20	0	EIF4G2_input.fastq.gz

Data Submission Information

ENCODE_alias	ENCODE_accession	object_type	assay_type	Sample_ID	SAMPLENAMEID	Selected	Status	Status_Date	Project	protocol_folder	protocol_file_name	ID
chris-burge:EIF4G2	ENCSR600HIW	experiment	RNA Bind-n-Seq	EIF4G2		Yes	Released	2022-07-12	ENCODE3			8003
chris-burge:EIF4G2-input-cntl	ENCSR268DJR	experiment	RNA Bind-n-Seq	EIF4G2		Yes	Released	2022-07-12	ENCODE3			8004
chris-burge:lib-EIF4G2-1	ENCLB877DNP	library	RNA Bind-n-Seq	EIF4G2		Yes	Released	2022-07-12	ENCODE3			8191
chris-burge:lib-EIF4G2-2	ENCLB714KDL	library	RNA Bind-n-Seq	EIF4G2		Yes	Released	2022-07-12	ENCODE3			8192
chris-burge:lib-EIF4G2-3	ENCLB770VON	library	RNA Bind-n-Seq	EIF4G2		Yes	Released	2022-07-12	ENCODE3			8193
chris-burge:lib-EIF4G2-4	ENCLB521MSN	library	RNA Bind-n-Seq	EIF4G2		Yes	Released	2022-07-12	ENCODE3			8194
chris-burge:lib-EIF4G2-5	ENCLB585BNT	library	RNA Bind-n-Seq	EIF4G2		Yes	Released	2022-07-12	ENCODE3			8195
chris-burge:lib-EIF4G2-input-cntl	ENCLB480KIG	library	RNA Bind-n-Seq	EIF4G2		Yes	Released	2022-07-12	ENCODE3			8196
chris-burge:EIF4G2_1300.fastq.gz	ENCFF531KCO	file_fastq	RNA Bind-n-Seq	EIF4G2		Yes	Released	2022-07-14	ENCODE3			8665
chris-burge:EIF4G2_20.fastq.gz	ENCFF483PKV	file_fastq	RNA Bind-n-Seq	EIF4G2		Yes	Released	2022-07-14	ENCODE3			8666
chris-burge:EIF4G2_320.fastq.gz	ENCFF798BTI	file_fastq	RNA Bind-n-Seq	EIF4G2		Yes	Released	2022-07-14	ENCODE3			8667
chris-burge:EIF4G2_5.fastq.gz	ENCFF747XEL	file_fastq	RNA Bind-n-Seq	EIF4G2		Yes	Released	2022-07-14	ENCODE3			8668
chris-burge:EIF4G2_80.fastq.gz	ENCFF613BOZ	file_fastq	RNA Bind-n-Seq	EIF4G2		Yes	Released	2022-07-14	ENCODE3			8669
chris-burge:EIF4G2_input.fastq.gz	ENCFF668QER	file_fastq	RNA Bind-n-Seq	EIF4G2		Yes	Released	2022-07-14	ENCODE3			8670
chris-burge:EIF4G2_enrichment_R.4mers.txt	ENCFF409BQS	file_enrichment	RNA Bind-n-Seq	EIF4G2		Yes	Released	2022-07-14	ENCODE3			9063
chris-burge:EIF4G2_enrichment_R.5mers.txt	ENCFF083UGT	file_enrichment	RNA Bind-n-Seq	EIF4G2		Yes	Released	2022-07-14	ENCODE3			9064
chris-burge:EIF4G2_enrichment_R.6mers.txt	ENCFF047JVW	file_enrichment	RNA Bind-n-Seq	EIF4G2		Yes	Released	2022-07-14	ENCODE3			9065
chris-burge:EIF4G2_enrichment_R.7mers.txt	ENCFF310LNQ	file_enrichment	RNA Bind-n-Seq	EIF4G2		Yes	Released	2022-07-14	ENCODE3			9066
chris-burge:EIF4G2_est_binding_frac.4mers.txt	ENCFF125ULL	file_library-fraction	RNA Bind-n-Seq	EIF4G2		Yes	Released	2022-07-14	ENCODE3			9067
chris-burge:EIF4G2_est_binding_frac.5mers.txt	ENCFF582ZAS	file_library-fraction	RNA Bind-n-Seq	EIF4G2		Yes	Released	2022-07-14	ENCODE3			9068
chris-burge:EIF4G2_est_binding_frac.6mers.txt	ENCFF388SBU	file_library-fraction	RNA Bind-n-Seq	EIF4G2		Yes	Released	2022-07-14	ENCODE3			9069
chris-burge:EIF4G2_est_binding_frac.7mers.txt	ENCFF048OJX	file_library-fraction	RNA Bind-n-Seq	EIF4G2		Yes	Released	2022-07-14	ENCODE3			9070
chris-burge:EIF4G2.logo_1.PWM.txt	ENCFF196LGM	file_enrichment	RNA Bind-n-Seq	EIF4G2		Yes	Released	2022-07-14	ENCODE3			9071
chris-burge:EIF4G2.logo_2.PWM.txt	ENCFF519MEJ	file_enrichment	RNA Bind-n-Seq	EIF4G2		Yes	Released	2022-07-14	ENCODE3			9072
chris-burge:EIF4G2.logo_3.PWM.txt	ENCFF749OEM	file_enrichment	RNA Bind-n-Seq	EIF4G2		Yes	Released	2022-07-14	ENCODE3			9073
chris-burge:K562.with_motif.EIF4G2.bed.gz	ENCFF396JVK	file_bed	RNA Bind-n-Seq	EIF4G2		Yes	Released	2022-07-14	ENCODE3			9715

File Information

file_name	file_format	output_type	assay_type	lab	derived_from	controlled_by	Project	Note
EIF4G2.logo.png	png	document	RNA Bind-n-Seq	Burge Lab			ENCODE3
EIF4G2_1300.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		EIF4G2_input.fastq.gz	ENCODE3
EIF4G2_20.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		EIF4G2_input.fastq.gz	ENCODE3
EIF4G2_320.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		EIF4G2_input.fastq.gz	ENCODE3
EIF4G2_5.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		EIF4G2_input.fastq.gz	ENCODE3
EIF4G2_80.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		EIF4G2_input.fastq.gz	ENCODE3
EIF4G2_input.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab			ENCODE3
EIF4G2_enrichment_R.4mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	EIF4G2_1300.fastq.gz,EIF4G2_20.fastq.gz,EIF4G2_320.fastq.gz,EIF4G2_5.fastq.gz,EIF4G2_80.fastq.gz,EIF4G2_input.fastq.gz		ENCODE3
EIF4G2_est_binding_frac.4mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	EIF4G2_1300.fastq.gz,EIF4G2_20.fastq.gz,EIF4G2_320.fastq.gz,EIF4G2_5.fastq.gz,EIF4G2_80.fastq.gz,EIF4G2_input.fastq.gz		ENCODE3
EIF4G2_enrichment_R.5mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	EIF4G2_1300.fastq.gz,EIF4G2_20.fastq.gz,EIF4G2_320.fastq.gz,EIF4G2_5.fastq.gz,EIF4G2_80.fastq.gz,EIF4G2_input.fastq.gz		ENCODE3
EIF4G2_est_binding_frac.5mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	EIF4G2_1300.fastq.gz,EIF4G2_20.fastq.gz,EIF4G2_320.fastq.gz,EIF4G2_5.fastq.gz,EIF4G2_80.fastq.gz,EIF4G2_input.fastq.gz		ENCODE3
EIF4G2_enrichment_R.6mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	EIF4G2_1300.fastq.gz,EIF4G2_20.fastq.gz,EIF4G2_320.fastq.gz,EIF4G2_5.fastq.gz,EIF4G2_80.fastq.gz,EIF4G2_input.fastq.gz		ENCODE3
EIF4G2_est_binding_frac.6mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	EIF4G2_1300.fastq.gz,EIF4G2_20.fastq.gz,EIF4G2_320.fastq.gz,EIF4G2_5.fastq.gz,EIF4G2_80.fastq.gz,EIF4G2_input.fastq.gz		ENCODE3
EIF4G2_enrichment_R.7mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	EIF4G2_1300.fastq.gz,EIF4G2_20.fastq.gz,EIF4G2_320.fastq.gz,EIF4G2_5.fastq.gz,EIF4G2_80.fastq.gz,EIF4G2_input.fastq.gz		ENCODE3
EIF4G2_est_binding_frac.7mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	EIF4G2_1300.fastq.gz,EIF4G2_20.fastq.gz,EIF4G2_320.fastq.gz,EIF4G2_5.fastq.gz,EIF4G2_80.fastq.gz,EIF4G2_input.fastq.gz		ENCODE3
K562.with_motif.EIF4G2.bed.gz	bed_RBNS	peaks	RNA Bind-n-Seq	Burge Lab	EIF4G2_enrichment_R.5mers.txt,260.01v02.IDR.out.0102merged.bed.blacklist_removed.bed.narrowPeak.encode.bed.gz		ENCODE3