Experiment Information (Status: Released)

RBP	CNOT4
gene_aliases
Status	Released
Status_date	2022-07-15
Project	ENCODE3
Note
ID	45

Motif Logo

Sample Information

Sample_Name	Sample_Type	Read_size_range	rbns_protein_concentration	FILE_ID
CNOT4-1300	RBNS	20-20	1300	CNOT4_1300.fastq.gz
CNOT4-20	RBNS	20-20	20	CNOT4_20.fastq.gz
CNOT4-320	RBNS	20-20	320	CNOT4_320.fastq.gz
CNOT4-5	RBNS	20-20	5	CNOT4_5.fastq.gz
CNOT4-80	RBNS	20-20	80	CNOT4_80.fastq.gz
CNOT4-input	CN	20-20	0	CNOT4_input.fastq.gz

Data Submission Information

ENCODE_alias	ENCODE_accession	object_type	assay_type	Sample_ID	SAMPLENAMEID	Selected	Status	Status_Date	Project	protocol_folder	protocol_file_name	ID
chris-burge:CNOT4	ENCSR806UCE	experiment	RNA Bind-n-Seq	CNOT4		Yes	Released	2022-07-12	ENCODE3			7995
chris-burge:CNOT4_ZCRB1-input-cntl	ENCSR566CVD	experiment	RNA Bind-n-Seq	CNOT4		Yes	Released	2022-07-12	ENCODE3			7996
chris-burge:lib-CNOT4_ZCRB1-input-cntl	ENCLB341YWW	library	RNA Bind-n-Seq	CNOT4		Yes	Released	2022-07-12	ENCODE3			8168
chris-burge:lib-CNOT4-1	ENCLB504YGT	library	RNA Bind-n-Seq	CNOT4		Yes	Released	2022-07-12	ENCODE3			8169
chris-burge:lib-CNOT4-2	ENCLB044AIO	library	RNA Bind-n-Seq	CNOT4		Yes	Released	2022-07-12	ENCODE3			8170
chris-burge:lib-CNOT4-3	ENCLB022LMM	library	RNA Bind-n-Seq	CNOT4		Yes	Released	2022-07-12	ENCODE3			8171
chris-burge:lib-CNOT4-4	ENCLB931PVV	library	RNA Bind-n-Seq	CNOT4		Yes	Released	2022-07-12	ENCODE3			8172
chris-burge:lib-CNOT4-5	ENCLB570XHM	library	RNA Bind-n-Seq	CNOT4		Yes	Released	2022-07-12	ENCODE3			8173
chris-burge:CNOT4_1300.fastq.gz	ENCFF897BPT	file_fastq	RNA Bind-n-Seq	CNOT4		Yes	Released	2022-07-14	ENCODE3			8641
chris-burge:CNOT4_20.fastq.gz	ENCFF798CEK	file_fastq	RNA Bind-n-Seq	CNOT4		Yes	Released	2022-07-14	ENCODE3			8642
chris-burge:CNOT4_320.fastq.gz	ENCFF751TQU	file_fastq	RNA Bind-n-Seq	CNOT4		Yes	Released	2022-07-14	ENCODE3			8643
chris-burge:CNOT4_5.fastq.gz	ENCFF763IRH	file_fastq	RNA Bind-n-Seq	CNOT4		Yes	Released	2022-07-14	ENCODE3			8644
chris-burge:CNOT4_80.fastq.gz	ENCFF962UIH	file_fastq	RNA Bind-n-Seq	CNOT4		Yes	Released	2022-07-14	ENCODE3			8645
chris-burge:CNOT4_input.fastq.gz	ENCFF421KWK	file_fastq	RNA Bind-n-Seq	CNOT4		Yes	Released	2022-07-14	ENCODE3			8646
chris-burge:CNOT4_enrichment_R.4mers.txt	ENCFF691NQF	file_enrichment	RNA Bind-n-Seq	CNOT4		Yes	Released	2022-07-14	ENCODE3			9027
chris-burge:CNOT4_enrichment_R.5mers.txt	ENCFF935NYJ	file_enrichment	RNA Bind-n-Seq	CNOT4		Yes	Released	2022-07-14	ENCODE3			9028
chris-burge:CNOT4_enrichment_R.6mers.txt	ENCFF291WEC	file_enrichment	RNA Bind-n-Seq	CNOT4		Yes	Released	2022-07-14	ENCODE3			9029
chris-burge:CNOT4_enrichment_R.7mers.txt	ENCFF497RAZ	file_enrichment	RNA Bind-n-Seq	CNOT4		Yes	Released	2022-07-14	ENCODE3			9030
chris-burge:CNOT4_est_binding_frac.4mers.txt	ENCFF420JBE	file_library-fraction	RNA Bind-n-Seq	CNOT4		Yes	Released	2022-07-14	ENCODE3			9031
chris-burge:CNOT4_est_binding_frac.5mers.txt	ENCFF553OKX	file_library-fraction	RNA Bind-n-Seq	CNOT4		Yes	Released	2022-07-14	ENCODE3			9032
chris-burge:CNOT4_est_binding_frac.6mers.txt	ENCFF724TVE	file_library-fraction	RNA Bind-n-Seq	CNOT4		Yes	Released	2022-07-14	ENCODE3			9033
chris-burge:CNOT4_est_binding_frac.7mers.txt	ENCFF485KVS	file_library-fraction	RNA Bind-n-Seq	CNOT4		Yes	Released	2022-07-14	ENCODE3			9034

File Information

file_name	file_format	output_type	assay_type	lab	derived_from	controlled_by	Project	Note
CNOT4.logo.png	png	document	RNA Bind-n-Seq	Burge Lab			ENCODE3
CNOT4_1300.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		CNOT4_input.fastq.gz	ENCODE3
CNOT4_20.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		CNOT4_input.fastq.gz	ENCODE3
CNOT4_320.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		CNOT4_input.fastq.gz	ENCODE3
CNOT4_5.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		CNOT4_input.fastq.gz	ENCODE3
CNOT4_80.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		CNOT4_input.fastq.gz	ENCODE3
CNOT4_input.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab			ENCODE3
CNOT4_enrichment_R.4mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	CNOT4_1300.fastq.gz,CNOT4_20.fastq.gz,CNOT4_320.fastq.gz,CNOT4_5.fastq.gz,CNOT4_80.fastq.gz,CNOT4_input.fastq.gz		ENCODE3
CNOT4_est_binding_frac.4mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	CNOT4_1300.fastq.gz,CNOT4_20.fastq.gz,CNOT4_320.fastq.gz,CNOT4_5.fastq.gz,CNOT4_80.fastq.gz,CNOT4_input.fastq.gz		ENCODE3
CNOT4_enrichment_R.5mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	CNOT4_1300.fastq.gz,CNOT4_20.fastq.gz,CNOT4_320.fastq.gz,CNOT4_5.fastq.gz,CNOT4_80.fastq.gz,CNOT4_input.fastq.gz		ENCODE3
CNOT4_est_binding_frac.5mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	CNOT4_1300.fastq.gz,CNOT4_20.fastq.gz,CNOT4_320.fastq.gz,CNOT4_5.fastq.gz,CNOT4_80.fastq.gz,CNOT4_input.fastq.gz		ENCODE3
CNOT4_enrichment_R.6mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	CNOT4_1300.fastq.gz,CNOT4_20.fastq.gz,CNOT4_320.fastq.gz,CNOT4_5.fastq.gz,CNOT4_80.fastq.gz,CNOT4_input.fastq.gz		ENCODE3
CNOT4_est_binding_frac.6mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	CNOT4_1300.fastq.gz,CNOT4_20.fastq.gz,CNOT4_320.fastq.gz,CNOT4_5.fastq.gz,CNOT4_80.fastq.gz,CNOT4_input.fastq.gz		ENCODE3
CNOT4_enrichment_R.7mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	CNOT4_1300.fastq.gz,CNOT4_20.fastq.gz,CNOT4_320.fastq.gz,CNOT4_5.fastq.gz,CNOT4_80.fastq.gz,CNOT4_input.fastq.gz		ENCODE3
CNOT4_est_binding_frac.7mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	CNOT4_1300.fastq.gz,CNOT4_20.fastq.gz,CNOT4_320.fastq.gz,CNOT4_5.fastq.gz,CNOT4_80.fastq.gz,CNOT4_input.fastq.gz		ENCODE3