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SRRT RNA-Seq in K562



SRRT      CRISPR in K562      Control:

General Information
RBPSRRT
Cell_LineK562
MethodCRISPR
Exp_NameSRRT-BGKcLV44-K562
ENCODE_series_ID
Batch_IDBGKcLV44
Pool IDPool-241015
Local_Set_Nameset75
ENCODE_KD_Exp_ID
ENCODE_CN_Exp_ID
Rep1SRRT-BGKcLV44-63
Rep2SRRT-BGKcLV44-64
CN1NT-BGKcLV44-1
CN2NT-BGKcLV44-2
Rep1_qPCR10.3
Rep2_qPCR8.2
Rep1_WB62.8
Rep2_WB63.9053
Antibody Cat#A304-551A
Antibody Lot#lot # 1
Antibody DCC ID
StatusSubmitted
ProjectENCORE2
ID1609




Experiment Information (Status: NotSatisfied)
BGKcLV44-65BGKcLV44-66
idx00
TRCN#_or_BGC#BGC#0001063BGC#0001063
shRNA_or_gRNA_sequenceCGAGTACGATCGAAGGCGCACGAGTACGATCGAAGGCGCA
PAMGGGGGG
NameSRRT_99SRRT_99
Sample_IDBGKcLV44-65BGKcLV44-66
transduction_Date7/30/247/30/24
daysD6D6
RBP_nameSRRTSRRT
qPCR_result
Ave_qPCR
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc45374502
WB_result
Ave_WB
WB_DONE_date8/14/24,8/19/24
MW
IP
antibody_Cat#A304-551Alot # 1
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM00
Rep2_TPM00
Action
Library_start_date
repeat_library
Note
ID59465947




Western Blot
Western Blot info was not avaliable




Experiment Status
BGKcLV44-65BGKcLV44-66
Sample_IDBGKcLV44-65BGKcLV44-66
Sample Name
Sample Name
RBPSRRTSRRT
Cell_LineK562K562
Exp UID
StatusNotSatisfiedNotSatisfied
Status_date2024-10-082024-10-08
ProjectENCORE2ENCORE2
Note
ID1365813659




Library-Prep Information
Library info was not avaliable




Sequencing Information
Sequencing info was not avaliable




Data Submission Information
DCC submission information was not avaliable




File Information
Files of the experiment was not avaliable in the database