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SARNP
CRISPR
in K562
Control:
NT-BGKcLV33
General Information
Experiment Information
Sequencing Information
Data Submission
Files
General Information
RBP
SARNP
Cell_Line
K562
Method
CRISPR
Exp_Name
SARNP-BGKcLV33-K562
ENCODE_series_ID
ENCSR862NTU
Batch_ID
BGKcLV33
Pool ID
Pool-220418
Local_Set_Name
set53
ENCODE_KD_Exp_ID
ENCSR639XFV
ENCODE_CN_Exp_ID
ENCSR271ZAB
Rep1
SARNP-BGKcLV33-31
Rep2
SARNP-BGKcLV33-32
CN1
NT-BGKcLV33-1
CN2
NT-BGKcLV33-2
Rep1_qPCR
Rep2_qPCR
Rep1_WB
64.6
Rep2_WB
65.7
Antibody Cat#
A302-336A
Antibody Lot#
LOT #1
Antibody DCC ID
Status
Submitted
Project
ENCODE4
ID
900
Experiment Information
Western Blot
Experiment Status
Experiment Information (Status:
NotSatisfied
)
BGKcLV33-25
BGKcLV33-25
BGKcLV33-26
BGKcLV33-26
idx
1127
1206
1128
1207
TRCN#_or_BGC#
BGC#0000843
BGC#0000837
BGC#0000843
BGC#0000837
shRNA_or_gRNA_sequence
CAAGATGGCGACCGAGACGG
CGGCGTTCGCATCAAGTAAG
CAAGATGGCGACCGAGACGG
CGGCGTTCGCATCAAGTAAG
PAM
TGG
CGG
TGG
CGG
Name
SARNP_80
RUVBL2_97
SARNP_80
RUVBL2_97
Sample_ID
BGKcLV33-25
BGKcLV33-25
BGKcLV33-26
BGKcLV33-26
transduction_Date
12/7/21
2/22/22
12/7/21
2/22/22
days
D6
D6
D6
D6
RBP_name
SARNP
RUVBL2
SARNP
RUVBL2
qPCR_result
Ave_qPCR
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc
372
2493
375
1876
WB_result
0.0
0.0
0.0
0.0
Ave_WB
0.0
0.0
WB_DONE_date
1/19/22
3/2/22,3/7/22
MW
24kd
51kd
IP
antibody_Cat#
A303-209A
A302-536A
LOT #1
LOT #1
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM
0
0
0
0
Rep2_TPM
0
0
0
0
Action
Library_start_date
repeat_library
Note
ID
5267
5346
5268
5347
Western Blot
Western Blot info was not avaliable
Experiment Status
BGKcLV33-25
BGKcLV33-25
BGKcLV33-26
BGKcLV33-26
Sample_ID
BGKcLV33-25
BGKcLV33-25
BGKcLV33-26
BGKcLV33-26
Sample Name
Sample Name
RBP
SARNP
RUVBL2
SARNP
RUVBL2
Cell_Line
K562
K562
K562
K562
Exp UID
Status
NotSatisfied
NotSatisfied
NotSatisfied
NotSatisfied
Status_date
2022-03-30
2022-03-30
2022-03-30
2022-03-30
Project
ENCODE4
ENCODE4
ENCODE4
ENCODE4
Note
ID
10711
10769
10712
10770
Library-Prep
Sequencing
Library-Prep Information
Library info was not avaliable
Sequencing Information
Sequencing info was not avaliable
Data Submission Information
DCC submission information was not avaliable
File Information
Files of the experiment was not avaliable in the database
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