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CIRBP
CRISPR
in K562
Control:
NT-BGKcLV11
General Information
Experiment Information
Sequencing Information
Data Submission
Files
General Information
RBP
CIRBP
Cell_Line
K562
Method
CRISPR
Exp_Name
CIRBP-BGKcLV11-K562
ENCODE_series_ID
ENCSR158LDQ
Batch_ID
BGKcLV11
Pool ID
Pool-190423
Local_Set_Name
set42
ENCODE_KD_Exp_ID
ENCSR452KAP
ENCODE_CN_Exp_ID
ENCSR292PXV
Rep1
CIRBP-BGKcLV11-33
Rep2
CIRBP-BGKcLV11-34
CN1
NT-BGKcLV11-1
CN2
NT-BGKcLV11-2
Rep1_qPCR
41.4
Rep2_qPCR
47.4
Rep1_WB
73.5
Rep2_WB
80.7
Antibody Cat#
RN032P
Antibody Lot#
Antibody DCC ID
ENCAB000BFF
Status
Released
Project
ENCODE4
ID
166
Experiment Information
Western Blot
Experiment Status
Experiment Information (Status:
NotSatisfied
)
BGKcLV11-31
BGKcLV11-32
idx
347
348
TRCN#_or_BGC#
BGC#0000252
BGC#0000252
shRNA_or_gRNA_sequence
AGCGTCGTCAATGTTCTCAA
AGCGTCGTCAATGTTCTCAA
PAM
AGG
AGG
Name
CIRBP_87
CIRBP_87
Sample_ID
BGKcLV11-31
BGKcLV11-32
transduction_Date
8/3/18
8/3/18
days
Day 6
Day 6
RBP_name
CIRBP
CIRBP
qPCR_result
61.8
54.8
Ave_qPCR
58.3
RT-qPCR_primer-F
TGTGGTGCGCTGTCTTCC
RT-qPCR_primer-R
AAACTCAGCCCTCCAACAAA
protein_conc
2722
2974
WB_result
42.5
52.6
Ave_WB
47.6
WB_DONE_date
1/28/19
MW
19 kDa
no more AB
IP
antibody_Cat#
RN032P
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM
169.5
0
Rep2_TPM
101.5
0
Action
Library_start_date
repeat_library
Note
ID
4447
4448
Western Blot
Western Blot info was not avaliable
Experiment Status
BGKcLV11-31
BGKcLV11-32
Sample_ID
BGKcLV11-31
BGKcLV11-32
Sample Name
Sample Name
RBP
CIRBP
CIRBP
Cell_Line
K562
K562
Exp UID
Status
NotSatisfied
NotSatisfied
Status_date
2019-08-10
2019-08-10
Project
ENCODE4
ENCODE4
Note
ID
2729
2730
Library-Prep
Sequencing
Library-Prep Information
Library info was not avaliable
Sequencing Information
Sequencing info was not avaliable
Data Submission Information
DCC submission information was not avaliable
File Information
Files of the experiment was not avaliable in the database
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