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NIPBL
CRISPR
in K562
Control:
NT-BGKcLV08
General Information
Experiment Information
Sequencing Information
Data Submission
Files
General Information
RBP
NIPBL
Cell_Line
K562
Method
CRISPR
Exp_Name
NIPBL-BGKcLV08-K562
ENCODE_series_ID
ENCSR890SYA
Batch_ID
BGKcLV08
Pool ID
Pool-180901
Local_Set_Name
set41
ENCODE_KD_Exp_ID
ENCSR999DVK
ENCODE_CN_Exp_ID
ENCSR015KGT
Rep1
NIPBL-BGKcLV08-43
Rep2
NIPBL-BGKcLV08-44
CN1
NT-BGKcLV08-1
CN2
NT-BGKcLV08-2
Rep1_qPCR
5.8
Rep2_qPCR
19.0
Rep1_WB
64.5
Rep2_WB
64.4
Antibody Cat#
Antibody Lot#
Antibody DCC ID
Status
Released
Project
ENCODE4
ID
206
Experiment Information
Western Blot
Experiment Status
Experiment Information (Status:
NotSatisfied
)
BGKcLV08-45
BGKcLV08-46
idx
270
271
TRCN#_or_BGC#
BGC#0000130
BGC#0000130
shRNA_or_gRNA_sequence
TCCCCGCAAGAGTAGTAATG
TCCCCGCAAGAGTAGTAATG
PAM
GGG
GGG
Name
NIPBL-88F
NIPBL-88F
Sample_ID
BGKcLV08-45
BGKcLV08-46
transduction_Date
3/8/18
3/8/18
days
Day 6
Day 6
RBP_name
NIPBL
NIPBL
qPCR_result
Ave_qPCR
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc
3584
3633
WB_result
54.8
38.9
Ave_WB
46.9
WB_DONE_date
4/13/18
MW
320kDa
IP
antibody_Cat#
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM
23
0
Rep2_TPM
25.7
0
Action
Library_start_date
repeat_library
Note
ID
4370
4371
Western Blot
Western Blot info was not avaliable
Experiment Status
BGKcLV08-45
BGKcLV08-46
Sample_ID
BGKcLV08-45
BGKcLV08-46
Sample Name
Sample Name
RBP
NIPBL
NIPBL
Cell_Line
K562
K562
Exp UID
Status
NotSatisfied
NotSatisfied
Status_date
2020-10-16
2020-10-16
Project
ENCODE4
ENCODE4
Note
ID
6225
6226
Library-Prep
Sequencing
Library-Prep Information
Library info was not avaliable
Sequencing Information
Sequencing info was not avaliable
Data Submission Information
DCC submission information was not avaliable
File Information
Files of the experiment was not avaliable in the database
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