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RBM42
CRISPR
in HepG2
Batch: BGHcLV50
Experiment Information
Sequencing Information
Data Submission
Files
Experiment Information
Western Blot
Experiment Status
Experiment Information (Status:
Sequenced
)
BGHcLV50-91
BGHcLV50-91
BGHcLV50-92
BGHcLV50-92
idx
0
0
0
0
TRCN#_or_BGC#
BGC#0001364
BGC#0001364
BGC#0001364
BGC#0001364
shRNA_or_gRNA_sequence
TGTTGGTCGCGATAATTGGG
TGTTGGTCGCGATAATTGGG
TGTTGGTCGCGATAATTGGG
TGTTGGTCGCGATAATTGGG
PAM
CGG
CGG
CGG
CGG
Name
RBM42_93
RBM42_93
RBM42_93
RBM42_93
Sample_ID
BGHcLV50-91
BGHcLV50-91
BGHcLV50-92
BGHcLV50-92
transduction_Date
7/29/25
7/29/25
7/29/25
7/29/25
days
D6
D6
D6
D6
RBP_name
RBM42
RBM42
RBM42
RBM42
qPCR_result
63.3
64.0
Ave_qPCR
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc
3574
3574
3102
3102
WB_result
64.1
51.1
51.6
56.9
Ave_WB
WB_DONE_date
8/21/25
9/16/25
MW
50KD
50KD
IP
antibody_Cat#
A305-139A
A305-138A
LOT #1
LOT #1
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM
0
0
0
0
Rep2_TPM
0
0
0
0
Action
Ready
Ready
Library_start_date
repeat_library
Note
ID
10095
10097
10096
10098
Western Blot
Western Blot info was not avaliable
Experiment Status
BGHcLV50-91
BGHcLV50-91
BGHcLV50-92
BGHcLV50-92
Sample_ID
BGHcLV50-91
BGHcLV50-91
BGHcLV50-92
BGHcLV50-92
Sample Name
Sample Name
RBM42-BGHcLV50-91
RBM42-BGHcLV50-92
RBP
RBM42
RBM42
RBM42
RBM42
Cell_Line
HepG2
HepG2
HepG2
HepG2
Exp UID
Status
Sequenced
NotSatisfied
Sequenced
NotSatisfied
Status_date
2025-10-30
2025-09-30
2025-10-30
2025-09-30
Project
ENCORE2
ENCORE2
ENCORE2
ENCORE2
Note
ID
14466
14546
14467
14547
Library-Prep
Sequencing
Library-Prep Information
BGHcLV50-91
BGHcLV50-92
Sample #
19
20
Sample Name
RBM42-BGHcLV50-91
RBM42-BGHcLV50-92
Sample_Name_Alias
Index Well Position
C12
D12
Index_table
IDT_UniqueDualIndex_96_V2
IDT_UniqueDualIndex_96_V2
LibPrep_date
2025-10-01
2025-10-01
Lib_ID
Lib-251001
Lib-251001
Tecan_Location
Tecan
Tecan_date
Size_bp
292
287
Peak_Molarity
71.10
65.00
libSampleQC_DNA_Well
RIN
libSample_RNA_Well
SampleQC_method
TapeStation_2022
TapeStation_2022
SampleQC_date
2025-10-03
2025-10-03
Sample_ID
BGHcLV50-91
BGHcLV50-92
RBP
RBM42
RBM42
Batch_ID
BGHcLV50
BGHcLV50
WB_result
64.100
51.600
Library Description
TruSeq mRNA
TruSeq mRNA
Repeat_Library_Suffix
Lib_Status
SendToSequence
SendToSequence
Project
ENCORE2
ENCORE2
ID
4834
4835
Sequencing Information
BGHcLV50-91
BGHcLV50-92
Sample_ID
BGHcLV50-91
BGHcLV50-92
Sample Name
RBM42-BGHcLV50-91
RBM42-BGHcLV50-92
Pool ID
Pool-251003
Pool-251003
LocalServer_folder
total_reads
0
0
total_aligned_reads
0
0
unique_aligned_reads
0
0
percent_uniqueAligned
correlation_replicates
spikein_reads
0
0
percent_spikeins
original_ReadLength
QC_Status
ReadyToQC
ReadyToQC
ID
3489
3490
Data Submission Information
DCC submission information was not avaliable
File Information
Files of the experiment was not avaliable in the database
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