PKN2      CRISPR in HepG2      Batch: BGHcLV50

Experiment Information (Status: Sequenced)
BGHcLV50-79BGHcLV50-80
idx00
TRCN#_or_BGC#BGC#0001433BGC#0001433
shRNA_or_gRNA_sequenceATGGCGTCCAACCCCGAACGATGGCGTCCAACCCCGAACG
PAMGGGGGG
NamePKN2_99PKN2_99
Sample_IDBGHcLV50-79BGHcLV50-80
transduction_Date7/29/257/29/25
daysD6D6
RBP_namePKN2PKN2
qPCR_result35.437.8
Ave_qPCR
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc21133180
WB_result93.288.9
Ave_WB
WB_DONE_date8/21/25
MW140kd
IP
antibody_Cat#8697Slot # 1
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM00
Rep2_TPM00
ActionReadyReady
Library_start_date
repeat_library
Note
ID1008110082




Western Blot
Western Blot info was not avaliable




Experiment Status
BGHcLV50-79BGHcLV50-80
Sample_IDBGHcLV50-79BGHcLV50-80
Sample Name
Sample NamePKN2-BGHcLV50-79PKN2-BGHcLV50-80
RBPPKN2PKN2
Cell_LineHepG2HepG2
Exp UID
StatusSequencedSequenced
Status_date2025-10-302025-10-30
ProjectENCORE2ENCORE2
Note
ID1446214463




Library-Prep Information
BGHcLV50-79BGHcLV50-80
Sample #1516
Sample NamePKN2-BGHcLV50-79PKN2-BGHcLV50-80
Sample_Name_Alias
Index Well PositionG11H11
Index_tableIDT_UniqueDualIndex_96_V2IDT_UniqueDualIndex_96_V2
LibPrep_date2025-10-012025-10-01
Lib_IDLib-251001Lib-251001
Tecan_Location
Tecan
Tecan_date
Size_bp280284
Peak_Molarity76.1048.20
libSampleQC_DNA_Well
RIN
libSample_RNA_Well
SampleQC_methodTapeStation_2022TapeStation_2022
SampleQC_date2025-10-032025-10-03
Sample_IDBGHcLV50-79BGHcLV50-80
RBPPKN2PKN2
Batch_IDBGHcLV50BGHcLV50
WB_result93.20088.900
Library DescriptionTruSeq mRNATruSeq mRNA
Repeat_Library_Suffix
Lib_StatusSendToSequenceSendToSequence
ProjectENCORE2ENCORE2
ID48304831




Sequencing Information
BGHcLV50-79BGHcLV50-80
Sample_IDBGHcLV50-79BGHcLV50-80
Sample NamePKN2-BGHcLV50-79PKN2-BGHcLV50-80
Pool IDPool-251003Pool-251003
LocalServer_folder
total_reads00
total_aligned_reads00
unique_aligned_reads00
percent_uniqueAligned
correlation_replicates
spikein_reads00
percent_spikeins
original_ReadLength
QC_StatusReadyToQCReadyToQC
ID34853486




Data Submission Information
DCC submission information was not avaliable




File Information
Files of the experiment was not avaliable in the database