CAPRIN1      CRISPR in HepG2      Batch: BGHcLV50

Experiment Information (Status: Sequenced)
BGHcLV50-13BGHcLV50-14
idx00
TRCN#_or_BGC#BGC#0001403BGC#0001403
shRNA_or_gRNA_sequenceCTCCCGGAGGAACCCGACGGCTCCCGGAGGAACCCGACGG
PAMCGGCGG
NameCAPRIN1_92CAPRIN1_92
Sample_IDBGHcLV50-13BGHcLV50-14
transduction_Date7/29/257/29/25
daysD6D6
RBP_nameCAPRIN1CAPRIN1
qPCR_result7.418.0
Ave_qPCR
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc32942855
WB_result64.156.7
Ave_WB
WB_DONE_date8/11/25
MW78kDa
IPRabbit / I
antibody_Cat#A303-882ALOT# 1
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM00
Rep2_TPM00
ActionReadyReady
Library_start_date
repeat_library
Note
ID1001510016




Western Blot
Western Blot info was not avaliable




Experiment Status
BGHcLV50-13BGHcLV50-14
Sample_IDBGHcLV50-13BGHcLV50-14
Sample Name
Sample NameCAPRIN1-BGHcLV50-13CAPRIN1-BGHcLV50-14
RBPCAPRIN1CAPRIN1
Cell_LineHepG2HepG2
Exp UID
StatusSequencedSequenced
Status_date2025-10-302025-10-30
ProjectENCORE2ENCORE2
Note
ID1445214453




Library-Prep Information
BGHcLV50-13BGHcLV50-14
Sample #56
Sample NameCAPRIN1-BGHcLV50-13CAPRIN1-BGHcLV50-14
Sample_Name_Alias
Index Well PositionE10F10
Index_tableIDT_UniqueDualIndex_96_V2IDT_UniqueDualIndex_96_V2
LibPrep_date2025-10-012025-10-01
Lib_IDLib-251001Lib-251001
Tecan_Location
Tecan
Tecan_date
Size_bp285282
Peak_Molarity56.2045.90
libSampleQC_DNA_Well
RIN
libSample_RNA_Well
SampleQC_methodTapeStation_2022TapeStation_2022
SampleQC_date2025-10-032025-10-03
Sample_IDBGHcLV50-13BGHcLV50-14
RBPCAPRIN1CAPRIN1
Batch_IDBGHcLV50BGHcLV50
WB_result64.10056.700
Library DescriptionTruSeq mRNATruSeq mRNA
Repeat_Library_Suffix
Lib_StatusSendToSequenceSendToSequence
ProjectENCORE2ENCORE2
ID48204821




Sequencing Information
BGHcLV50-13BGHcLV50-14
Sample_IDBGHcLV50-13BGHcLV50-14
Sample NameCAPRIN1-BGHcLV50-13CAPRIN1-BGHcLV50-14
Pool IDPool-251003Pool-251003
LocalServer_folder
total_reads00
total_aligned_reads00
unique_aligned_reads00
percent_uniqueAligned
correlation_replicates
spikein_reads00
percent_spikeins
original_ReadLength
QC_StatusReadyToQCReadyToQC
ID34753476




Data Submission Information
DCC submission information was not avaliable




File Information
Files of the experiment was not avaliable in the database