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CAPRIN1
CRISPR
in HepG2
Batch: BGHcLV50
Experiment Information
Sequencing Information
Data Submission
Files
Experiment Information
Western Blot
Experiment Status
Experiment Information (Status:
Sequenced
)
BGHcLV50-13
BGHcLV50-14
idx
0
0
TRCN#_or_BGC#
BGC#0001403
BGC#0001403
shRNA_or_gRNA_sequence
CTCCCGGAGGAACCCGACGG
CTCCCGGAGGAACCCGACGG
PAM
CGG
CGG
Name
CAPRIN1_92
CAPRIN1_92
Sample_ID
BGHcLV50-13
BGHcLV50-14
transduction_Date
7/29/25
7/29/25
days
D6
D6
RBP_name
CAPRIN1
CAPRIN1
qPCR_result
7.4
18.0
Ave_qPCR
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc
3294
2855
WB_result
64.1
56.7
Ave_WB
WB_DONE_date
8/11/25
MW
78kDa
IP
Rabbit / I
antibody_Cat#
A303-882A
LOT# 1
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM
0
0
Rep2_TPM
0
0
Action
Ready
Ready
Library_start_date
repeat_library
Note
ID
10015
10016
Western Blot
Western Blot info was not avaliable
Experiment Status
BGHcLV50-13
BGHcLV50-14
Sample_ID
BGHcLV50-13
BGHcLV50-14
Sample Name
Sample Name
CAPRIN1-BGHcLV50-13
CAPRIN1-BGHcLV50-14
RBP
CAPRIN1
CAPRIN1
Cell_Line
HepG2
HepG2
Exp UID
Status
Sequenced
Sequenced
Status_date
2025-10-30
2025-10-30
Project
ENCORE2
ENCORE2
Note
ID
14452
14453
Library-Prep
Sequencing
Library-Prep Information
BGHcLV50-13
BGHcLV50-14
Sample #
5
6
Sample Name
CAPRIN1-BGHcLV50-13
CAPRIN1-BGHcLV50-14
Sample_Name_Alias
Index Well Position
E10
F10
Index_table
IDT_UniqueDualIndex_96_V2
IDT_UniqueDualIndex_96_V2
LibPrep_date
2025-10-01
2025-10-01
Lib_ID
Lib-251001
Lib-251001
Tecan_Location
Tecan
Tecan_date
Size_bp
285
282
Peak_Molarity
56.20
45.90
libSampleQC_DNA_Well
RIN
libSample_RNA_Well
SampleQC_method
TapeStation_2022
TapeStation_2022
SampleQC_date
2025-10-03
2025-10-03
Sample_ID
BGHcLV50-13
BGHcLV50-14
RBP
CAPRIN1
CAPRIN1
Batch_ID
BGHcLV50
BGHcLV50
WB_result
64.100
56.700
Library Description
TruSeq mRNA
TruSeq mRNA
Repeat_Library_Suffix
Lib_Status
SendToSequence
SendToSequence
Project
ENCORE2
ENCORE2
ID
4820
4821
Sequencing Information
BGHcLV50-13
BGHcLV50-14
Sample_ID
BGHcLV50-13
BGHcLV50-14
Sample Name
CAPRIN1-BGHcLV50-13
CAPRIN1-BGHcLV50-14
Pool ID
Pool-251003
Pool-251003
LocalServer_folder
total_reads
0
0
total_aligned_reads
0
0
unique_aligned_reads
0
0
percent_uniqueAligned
correlation_replicates
spikein_reads
0
0
percent_spikeins
original_ReadLength
QC_Status
ReadyToQC
ReadyToQC
ID
3475
3476
Data Submission Information
DCC submission information was not avaliable
File Information
Files of the experiment was not avaliable in the database
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