NUP153      CRISPR in HepG2      Batch: BGHcLV49

Experiment Information (Status: Sequenced)
BGHcLV49-75BGHcLV49-76
idx00
TRCN#_or_BGC#BGC#0001039BGC#0001039
shRNA_or_gRNA_sequenceGTGGCGGCAAGATCCGGACGGTGGCGGCAAGATCCGGACG
PAMCGGCGG
NameNUP153_96NUP153_96
Sample_IDBGHcLV49-75BGHcLV49-76
transduction_Date6/6/256/6/25
daysD6D6
RBP_nameNUP153NUP153
qPCR_result26.439.9
Ave_qPCR
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc48993617
WB_result90.793.4
Ave_WB
WB_DONE_date7/3/25need discussion
MW154kd
IP
antibody_Cat#A301-788Alot # 1
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM00
Rep2_TPM00
ActionReadyReady
Library_start_date
repeat_library
Note
ID99599960




Western Blot
Western Blot info was not avaliable




Experiment Status
BGHcLV49-75BGHcLV49-76
Sample_IDBGHcLV49-75BGHcLV49-76
Sample Name
Sample NameNUP153-BGHcLV49-75NUP153-BGHcLV49-76
RBPNUP153NUP153
Cell_LineHepG2HepG2
Exp UID
StatusSequencedSequenced
Status_date2025-10-302025-10-30
ProjectENCORE2ENCORE2
Note
ID1435814359




Library-Prep Information
BGHcLV49-75BGHcLV49-76
Sample #5556
Sample NameNUP153-BGHcLV49-75NUP153-BGHcLV49-76
Sample_Name_Alias
Index Well PositionA08B08
Index_tableIDT_UniqueDualIndex_96_V2IDT_UniqueDualIndex_96_V2
LibPrep_date2025-08-202025-08-20
Lib_IDLib-250820Lib-250820
Tecan_Location
Tecan
Tecan_date
Size_bp273276
Peak_Molarity74.7081.10
libSampleQC_DNA_Well
RIN
libSample_RNA_Well
SampleQC_methodTapeStation_2022TapeStation_2022
SampleQC_date2025-09-102025-09-10
Sample_IDBGHcLV49-75BGHcLV49-76
RBPNUP153NUP153
Batch_IDBGHcLV49BGHcLV49
WB_result90.70093.400
Library DescriptionTruSeq mRNATruSeq mRNA
Repeat_Library_Suffix
Lib_StatusSendToSequenceSendToSequence
ProjectENCORE2ENCORE2
ID48004801




Sequencing Information
BGHcLV49-75BGHcLV49-76
Sample_IDBGHcLV49-75BGHcLV49-76
Sample NameNUP153-BGHcLV49-75NUP153-BGHcLV49-76
Pool IDPool-250916Pool-250916
LocalServer_folder
total_reads00
total_aligned_reads00
unique_aligned_reads00
percent_uniqueAligned
correlation_replicates
spikein_reads00
percent_spikeins
original_ReadLength
QC_StatusReadyToQCReadyToQC
ID35273528




Data Submission Information
DCC submission information was not avaliable




File Information
Files of the experiment was not avaliable in the database