Home
NEWS
Summary
Data Files
Search
FAQ
Admin Login
Top
NUP153
CRISPR
in HepG2
Batch: BGHcLV49
Experiment Information
Sequencing Information
Data Submission
Files
Experiment Information
Western Blot
Experiment Status
Experiment Information (Status:
Sequenced
)
BGHcLV49-75
BGHcLV49-76
idx
0
0
TRCN#_or_BGC#
BGC#0001039
BGC#0001039
shRNA_or_gRNA_sequence
GTGGCGGCAAGATCCGGACG
GTGGCGGCAAGATCCGGACG
PAM
CGG
CGG
Name
NUP153_96
NUP153_96
Sample_ID
BGHcLV49-75
BGHcLV49-76
transduction_Date
6/6/25
6/6/25
days
D6
D6
RBP_name
NUP153
NUP153
qPCR_result
26.4
39.9
Ave_qPCR
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc
4899
3617
WB_result
90.7
93.4
Ave_WB
WB_DONE_date
7/3/25
need discussion
MW
154kd
IP
antibody_Cat#
A301-788A
lot # 1
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM
0
0
Rep2_TPM
0
0
Action
Ready
Ready
Library_start_date
repeat_library
Note
ID
9959
9960
Western Blot
Western Blot info was not avaliable
Experiment Status
BGHcLV49-75
BGHcLV49-76
Sample_ID
BGHcLV49-75
BGHcLV49-76
Sample Name
Sample Name
NUP153-BGHcLV49-75
NUP153-BGHcLV49-76
RBP
NUP153
NUP153
Cell_Line
HepG2
HepG2
Exp UID
Status
Sequenced
Sequenced
Status_date
2025-10-30
2025-10-30
Project
ENCORE2
ENCORE2
Note
ID
14358
14359
Library-Prep
Sequencing
Library-Prep Information
BGHcLV49-75
BGHcLV49-76
Sample #
55
56
Sample Name
NUP153-BGHcLV49-75
NUP153-BGHcLV49-76
Sample_Name_Alias
Index Well Position
A08
B08
Index_table
IDT_UniqueDualIndex_96_V2
IDT_UniqueDualIndex_96_V2
LibPrep_date
2025-08-20
2025-08-20
Lib_ID
Lib-250820
Lib-250820
Tecan_Location
Tecan
Tecan_date
Size_bp
273
276
Peak_Molarity
74.70
81.10
libSampleQC_DNA_Well
RIN
libSample_RNA_Well
SampleQC_method
TapeStation_2022
TapeStation_2022
SampleQC_date
2025-09-10
2025-09-10
Sample_ID
BGHcLV49-75
BGHcLV49-76
RBP
NUP153
NUP153
Batch_ID
BGHcLV49
BGHcLV49
WB_result
90.700
93.400
Library Description
TruSeq mRNA
TruSeq mRNA
Repeat_Library_Suffix
Lib_Status
SendToSequence
SendToSequence
Project
ENCORE2
ENCORE2
ID
4800
4801
Sequencing Information
BGHcLV49-75
BGHcLV49-76
Sample_ID
BGHcLV49-75
BGHcLV49-76
Sample Name
NUP153-BGHcLV49-75
NUP153-BGHcLV49-76
Pool ID
Pool-250916
Pool-250916
LocalServer_folder
total_reads
0
0
total_aligned_reads
0
0
unique_aligned_reads
0
0
percent_uniqueAligned
correlation_replicates
spikein_reads
0
0
percent_spikeins
original_ReadLength
QC_Status
ReadyToQC
ReadyToQC
ID
3527
3528
Data Submission Information
DCC submission information was not avaliable
File Information
Files of the experiment was not avaliable in the database
Back