NUFIP2      CRISPR in HepG2      Batch: BGHcLV49

Experiment Information (Status: Sequenced)
BGHcLV49-71BGHcLV49-72
idx00
TRCN#_or_BGC#BGC#0001036BGC#0001036
shRNA_or_gRNA_sequenceGTCCCAGCCGCTTTCAATGGGTCCCAGCCGCTTTCAATGG
PAMAGGAGG
NameNUFIP2_88NUFIP2_88
Sample_IDBGHcLV49-71BGHcLV49-72
transduction_Date6/6/256/6/25
daysD6D6
RBP_nameNUFIP2NUFIP2
qPCR_result22.821.9
Ave_qPCR
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc44305335
WB_result80.583.8
Ave_WB
WB_DONE_date7/3/25
MW76kd
IP
antibody_Cat#A301-600Alot # 1
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM00
Rep2_TPM00
ActionReadyReady
Library_start_date
repeat_library
Note
ID99559956




Western Blot
Western Blot info was not avaliable




Experiment Status
BGHcLV49-71BGHcLV49-72
Sample_IDBGHcLV49-71BGHcLV49-72
Sample Name
Sample NameNUFIP2-BGHcLV49-71NUFIP2-BGHcLV49-72
RBPNUFIP2NUFIP2
Cell_LineHepG2HepG2
Exp UID
StatusSequencedSequenced
Status_date2025-10-302025-10-30
ProjectENCORE2ENCORE2
Note
ID1435614357




Library-Prep Information
BGHcLV49-71BGHcLV49-72
Sample #5354
Sample NameNUFIP2-BGHcLV49-71NUFIP2-BGHcLV49-72
Sample_Name_Alias
Index Well PositionG07H07
Index_tableIDT_UniqueDualIndex_96_V2IDT_UniqueDualIndex_96_V2
LibPrep_date2025-08-202025-08-20
Lib_IDLib-250820Lib-250820
Tecan_Location
Tecan
Tecan_date
Size_bp268261
Peak_Molarity82.5059.60
libSampleQC_DNA_Well
RIN
libSample_RNA_Well
SampleQC_methodTapeStation_2022TapeStation_2022
SampleQC_date2025-09-102025-09-10
Sample_IDBGHcLV49-71BGHcLV49-72
RBPNUFIP2NUFIP2
Batch_IDBGHcLV49BGHcLV49
WB_result80.50083.800
Library DescriptionTruSeq mRNATruSeq mRNA
Repeat_Library_Suffix
Lib_StatusSendToSequenceSendToSequence
ProjectENCORE2ENCORE2
ID47984799




Sequencing Information
BGHcLV49-71BGHcLV49-72
Sample_IDBGHcLV49-71BGHcLV49-72
Sample NameNUFIP2-BGHcLV49-71NUFIP2-BGHcLV49-72
Pool IDPool-250916Pool-250916
LocalServer_folder
total_reads00
total_aligned_reads00
unique_aligned_reads00
percent_uniqueAligned
correlation_replicates
spikein_reads00
percent_spikeins
original_ReadLength
QC_StatusReadyToQCReadyToQC
ID35253526




Data Submission Information
DCC submission information was not avaliable




File Information
Files of the experiment was not avaliable in the database