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NUFIP2
CRISPR
in HepG2
Batch: BGHcLV49
Experiment Information
Sequencing Information
Data Submission
Files
Experiment Information
Western Blot
Experiment Status
Experiment Information (Status:
Sequenced
)
BGHcLV49-71
BGHcLV49-72
idx
0
0
TRCN#_or_BGC#
BGC#0001036
BGC#0001036
shRNA_or_gRNA_sequence
GTCCCAGCCGCTTTCAATGG
GTCCCAGCCGCTTTCAATGG
PAM
AGG
AGG
Name
NUFIP2_88
NUFIP2_88
Sample_ID
BGHcLV49-71
BGHcLV49-72
transduction_Date
6/6/25
6/6/25
days
D6
D6
RBP_name
NUFIP2
NUFIP2
qPCR_result
22.8
21.9
Ave_qPCR
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc
4430
5335
WB_result
80.5
83.8
Ave_WB
WB_DONE_date
7/3/25
MW
76kd
IP
antibody_Cat#
A301-600A
lot # 1
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM
0
0
Rep2_TPM
0
0
Action
Ready
Ready
Library_start_date
repeat_library
Note
ID
9955
9956
Western Blot
Western Blot info was not avaliable
Experiment Status
BGHcLV49-71
BGHcLV49-72
Sample_ID
BGHcLV49-71
BGHcLV49-72
Sample Name
Sample Name
NUFIP2-BGHcLV49-71
NUFIP2-BGHcLV49-72
RBP
NUFIP2
NUFIP2
Cell_Line
HepG2
HepG2
Exp UID
Status
Sequenced
Sequenced
Status_date
2025-10-30
2025-10-30
Project
ENCORE2
ENCORE2
Note
ID
14356
14357
Library-Prep
Sequencing
Library-Prep Information
BGHcLV49-71
BGHcLV49-72
Sample #
53
54
Sample Name
NUFIP2-BGHcLV49-71
NUFIP2-BGHcLV49-72
Sample_Name_Alias
Index Well Position
G07
H07
Index_table
IDT_UniqueDualIndex_96_V2
IDT_UniqueDualIndex_96_V2
LibPrep_date
2025-08-20
2025-08-20
Lib_ID
Lib-250820
Lib-250820
Tecan_Location
Tecan
Tecan_date
Size_bp
268
261
Peak_Molarity
82.50
59.60
libSampleQC_DNA_Well
RIN
libSample_RNA_Well
SampleQC_method
TapeStation_2022
TapeStation_2022
SampleQC_date
2025-09-10
2025-09-10
Sample_ID
BGHcLV49-71
BGHcLV49-72
RBP
NUFIP2
NUFIP2
Batch_ID
BGHcLV49
BGHcLV49
WB_result
80.500
83.800
Library Description
TruSeq mRNA
TruSeq mRNA
Repeat_Library_Suffix
Lib_Status
SendToSequence
SendToSequence
Project
ENCORE2
ENCORE2
ID
4798
4799
Sequencing Information
BGHcLV49-71
BGHcLV49-72
Sample_ID
BGHcLV49-71
BGHcLV49-72
Sample Name
NUFIP2-BGHcLV49-71
NUFIP2-BGHcLV49-72
Pool ID
Pool-250916
Pool-250916
LocalServer_folder
total_reads
0
0
total_aligned_reads
0
0
unique_aligned_reads
0
0
percent_uniqueAligned
correlation_replicates
spikein_reads
0
0
percent_spikeins
original_ReadLength
QC_Status
ReadyToQC
ReadyToQC
ID
3525
3526
Data Submission Information
DCC submission information was not avaliable
File Information
Files of the experiment was not avaliable in the database
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