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CLASP2
CRISPR
in HepG2
Batch: BGHcLV49
Experiment Information
Sequencing Information
Data Submission
Files
Experiment Information
Western Blot
Experiment Status
Experiment Information (Status:
Sequenced
)
BGHcLV49-17
BGHcLV49-18
idx
0
0
TRCN#_or_BGC#
BGC#0000696
BGC#0000696
shRNA_or_gRNA_sequence
GATGAGGACCTGTCTGATTG
GATGAGGACCTGTCTGATTG
PAM
TGG
TGG
Name
CLASP2_81
CLASP2_81
Sample_ID
BGHcLV49-17
BGHcLV49-18
transduction_Date
6/6/25
6/6/25
days
D6
D6
RBP_name
CLASP2
CLASP2
qPCR_result
29.0
27.0
Ave_qPCR
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc
5217
4638
WB_result
97.4
88.8
Ave_WB
WB_DONE_date
6/17/25
need discussion
MW
141kd
IP
Rabbit / I
antibody_Cat#
A302-155A
LOT #2
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM
0
0
Rep2_TPM
0
0
Action
Ready
Ready
Library_start_date
repeat_library
Note
ID
9899
9900
Western Blot
Western Blot info was not avaliable
Experiment Status
BGHcLV49-17
BGHcLV49-18
Sample_ID
BGHcLV49-17
BGHcLV49-18
Sample Name
Sample Name
CLASP2-BGHcLV49-17
CLASP2-BGHcLV49-18
RBP
CLASP2
CLASP2
Cell_Line
HepG2
HepG2
Exp UID
Status
Sequenced
Sequenced
Status_date
2025-10-30
2025-10-30
Project
ENCORE2
ENCORE2
Note
ID
14336
14337
Library-Prep
Sequencing
Library-Prep Information
BGHcLV49-17
BGHcLV49-18
Sample #
33
34
Sample Name
CLASP2-BGHcLV49-17
CLASP2-BGHcLV49-18
Sample_Name_Alias
Index Well Position
C05
D05
Index_table
IDT_UniqueDualIndex_96_V2
IDT_UniqueDualIndex_96_V2
LibPrep_date
2025-08-20
2025-08-20
Lib_ID
Lib-250820
Lib-250820
Tecan_Location
Tecan
Tecan_date
Size_bp
272
270
Peak_Molarity
72.70
70.00
libSampleQC_DNA_Well
RIN
libSample_RNA_Well
SampleQC_method
TapeStation_2022
TapeStation_2022
SampleQC_date
2025-09-10
2025-09-10
Sample_ID
BGHcLV49-17
BGHcLV49-18
RBP
CLASP2
CLASP2
Batch_ID
BGHcLV49
BGHcLV49
WB_result
97.400
88.800
Library Description
TruSeq mRNA
TruSeq mRNA
Repeat_Library_Suffix
Lib_Status
SendToSequence
SendToSequence
Project
ENCORE2
ENCORE2
ID
4778
4779
Sequencing Information
BGHcLV49-17
BGHcLV49-18
Sample_ID
BGHcLV49-17
BGHcLV49-18
Sample Name
CLASP2-BGHcLV49-17
CLASP2-BGHcLV49-18
Pool ID
Pool-250916
Pool-250916
LocalServer_folder
total_reads
0
0
total_aligned_reads
0
0
unique_aligned_reads
0
0
percent_uniqueAligned
correlation_replicates
spikein_reads
0
0
percent_spikeins
original_ReadLength
QC_Status
ReadyToQC
ReadyToQC
ID
3505
3506
Data Submission Information
DCC submission information was not avaliable
File Information
Files of the experiment was not avaliable in the database
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