non-target      CRISPR in HepG2      Batch: BGHcLV49

General Information

List KD experiments controlled by BGHcLV49-1 and BGHcLV49-2


NT-BGHcLV49-1,NT-BGHcLV49-2:No KD experiments controlled by NT-BGHcLV49-1 and NT-BGHcLV49-2 are available on the database

NT-BGHcLV49-1B,NT-BGHcLV49-2B:No KD experiments controlled by NT-BGHcLV49-1B and NT-BGHcLV49-2B are available on the database




Experiment Information (Status: Sequencing)
BGHcLV49-1BGHcLV49-2
idx00
TRCN#_or_BGC#
shRNA_or_gRNA_sequence
PAM
Namenon-targetnon-target
Sample_IDBGHcLV49-1BGHcLV49-2
transduction_Date6/6/256/6/25
daysD6D6
RBP_namenon-targetnon-target
qPCR_result
Ave_qPCR
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc05199
WB_result
Ave_WB
WB_DONE_date
MW
IP
antibody_Cat#
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM00
Rep2_TPM00
ActionReadyReady
Library_start_date
repeat_library
Note
ID98799880




Western Blot
Western Blot info was not avaliable




Experiment Status
BGHcLV49-1BGHcLV49-1BGHcLV49-2BGHcLV49-2
Sample_IDBGHcLV49-1BGHcLV49-1BGHcLV49-2BGHcLV49-2
Sample Name
Sample NameNT-BGHcLV49-1NT-BGHcLV49-1NT-BGHcLV49-2NT-BGHcLV49-2
RBPnon-targetnon-targetnon-targetnon-target
Cell_LineHepG2HepG2HepG2HepG2
Exp UID
StatusSequencingSequencingSequencingSequencing
Status_date2025-09-292025-09-292025-09-292025-09-29
ProjectENCORE2ENCORE2ENCORE2ENCORE2
Note
ID14326144461432714447




Library-Prep Information
BGHcLV49-1BGHcLV49-1BGHcLV49-2BGHcLV49-2
Sample #23692470
Sample NameNT-BGHcLV49-1NT-BGHcLV49-1BNT-BGHcLV49-2NT-BGHcLV49-2B
Sample_Name_Alias
Index Well PositionA04G09B04H09
Index_tableIDT_UniqueDualIndex_96_V2IDT_UniqueDualIndex_96_V2IDT_UniqueDualIndex_96_V2IDT_UniqueDualIndex_96_V2
LibPrep_date2025-08-202025-09-112025-08-202025-09-11
Lib_IDLib-250820Lib-250911Lib-250820Lib-250911
Tecan_Location
Tecan
Tecan_date
Size_bp262279263271
Peak_Molarity60.7098.2089.4093.40
libSampleQC_DNA_Well
RIN
libSample_RNA_Well
SampleQC_methodTapeStation_2022TapeStation_2022TapeStation_2022TapeStation_2022
SampleQC_date2025-09-102025-09-152025-09-102025-09-15
Sample_IDBGHcLV49-1BGHcLV49-1BGHcLV49-2BGHcLV49-2
RBPNTNTNTNT
Batch_IDBGHcLV49BGHcLV49BGHcLV49BGHcLV49
WB_result0.0000.0000.0000.000
Library DescriptionTruSeq mRNATruSeq mRNATruSeq mRNATruSeq mRNA
Repeat_Library_SuffixBB
Lib_StatusSendToSequenceSendToSequenceSendToSequenceSendToSequence
ProjectENCORE2ENCORE2ENCORE2ENCORE2
ID4768481447694815




Sequencing Information
Sequencing info was not avaliable




Data Submission Information
DCC submission information was not avaliable




File Information
Files of the experiment was not avaliable in the database