COPB1      CRISPR in HepG2      Batch: BGHcLV47

Experiment Information (Status: Sequenced)
BGHcLV47-9BGHcLV47-10
idx00
TRCN#_or_BGC#BGC#0001228BGC#0001228
shRNA_or_gRNA_sequenceATAACCAGAAACCATGACGGATAACCAGAAACCATGACGG
PAMCGGCGG
NameCOPB1_89UCOPB1_89U
Sample_IDBGHcLV47-9BGHcLV47-10
transduction_Date1/28/251/28/25
daysD6D6
RBP_nameCOPB1COPB1
qPCR_result
Ave_qPCR
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc18252027
WB_result60.059.2
Ave_WB
WB_DONE_date2/5/25
MW107kd
IPRabbit / I
antibody_Cat#A304-723ALOT #1
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM00
Rep2_TPM00
ActionReadyReady
Library_start_date
repeat_library
Note
ID97969797




Western Blot
Western Blot info was not avaliable




Experiment Status
BGHcLV47-9BGHcLV47-10
Sample_IDBGHcLV47-9BGHcLV47-10
Sample Name
Sample NameCOPB1-BGHcLV47-9COPB1-BGHcLV47-10
RBPCOPB1COPB1
Cell_LineHepG2HepG2
Exp UID
StatusSequencedSequenced
Status_date2025-05-142025-05-14
ProjectENCORE2ENCORE2
Note
ID1415414155




Library-Prep Information
BGHcLV47-9BGHcLV47-10
Sample #78
Sample NameCOPB1-BGHcLV47-9COPB1-BGHcLV47-10
Sample_Name_Alias
Index Well PositionG08H08
Index_tableIDT_UniqueDualIndex_96_V2IDT_UniqueDualIndex_96_V2
LibPrep_date2025-04-232025-04-23
Lib_IDLib-250423Lib-250423
Tecan_Location
Tecan
Tecan_date
Size_bp256268
Peak_Molarity33.4045.90
libSampleQC_DNA_Well
RIN
libSample_RNA_Well
SampleQC_methodTapeStation_2022TapeStation_2022
SampleQC_date2025-04-222025-04-22
Sample_IDBGHcLV47-9BGHcLV47-10
RBPCOPB1COPB1
Batch_IDBGHcLV47BGHcLV47
WB_result60.00059.200
Library DescriptionTruSeq mRNATruSeq mRNA
Repeat_Library_Suffix
Lib_StatusSendToSequenceSendToSequence
ProjectENCORE2ENCORE2
ID47184719




Sequencing Information
BGHcLV47-9BGHcLV47-10
Sample_IDBGHcLV47-9BGHcLV47-10
Sample NameCOPB1-BGHcLV47-9COPB1-BGHcLV47-10
Pool IDPool-250422Pool-250422
LocalServer_folder
total_reads00
total_aligned_reads00
unique_aligned_reads00
percent_uniqueAligned
correlation_replicates
spikein_reads00
percent_spikeins
original_ReadLength
QC_StatusReadyToQCReadyToQC
ID34213422




Data Submission Information
DCC submission information was not avaliable




File Information
Files of the experiment was not avaliable in the database