ASS1      CRISPR in HepG2      Batch: BGHcLV47

Experiment Information (Status: Sequenced)
BGHcLV47-3BGHcLV47-4
idx00
TRCN#_or_BGC#BGC#0001111BGC#0001111
shRNA_or_gRNA_sequenceCGTACTCCATCAGGTCATTGCGTACTCCATCAGGTCATTG
PAMCGGCGG
NameASS1_72ASS1_72
Sample_IDBGHcLV47-3BGHcLV47-4
transduction_Date1/28/251/28/25
daysD6D6
RBP_nameASS1ASS1
qPCR_result
Ave_qPCR
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc30753826
WB_result63.267.3
Ave_WB
WB_DONE_date2/6/25
MW47kdTUBULIN
IP
antibody_Cat#70720Slot# 1
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM00
Rep2_TPM00
ActionReadyReady
Library_start_date
repeat_library
Note
ID97909791




Western Blot
Western Blot info was not avaliable




Experiment Status
BGHcLV47-3BGHcLV47-4
Sample_IDBGHcLV47-3BGHcLV47-4
Sample Name
Sample NameASS1-BGHcLV47-3ASS1-BGHcLV47-4
RBPASS1ASS1
Cell_LineHepG2HepG2
Exp UID
StatusSequencedSequenced
Status_date2025-05-142025-05-14
ProjectENCORE2ENCORE2
Note
ID1415014151




Library-Prep Information
BGHcLV47-3BGHcLV47-4
Sample #34
Sample NameASS1-BGHcLV47-3ASS1-BGHcLV47-4
Sample_Name_Alias
Index Well PositionC08D08
Index_tableIDT_UniqueDualIndex_96_V2IDT_UniqueDualIndex_96_V2
LibPrep_date2025-04-232025-04-23
Lib_IDLib-250423Lib-250423
Tecan_Location
Tecan
Tecan_date
Size_bp267265
Peak_Molarity49.0049.40
libSampleQC_DNA_Well
RIN
libSample_RNA_Well
SampleQC_methodTapeStation_2022TapeStation_2022
SampleQC_date2025-04-222025-04-22
Sample_IDBGHcLV47-3BGHcLV47-4
RBPASS1ASS1
Batch_IDBGHcLV47BGHcLV47
WB_result63.20067.300
Library DescriptionTruSeq mRNATruSeq mRNA
Repeat_Library_Suffix
Lib_StatusSendToSequenceSendToSequence
ProjectENCORE2ENCORE2
ID47144715




Sequencing Information
BGHcLV47-3BGHcLV47-4
Sample_IDBGHcLV47-3BGHcLV47-4
Sample NameASS1-BGHcLV47-3ASS1-BGHcLV47-4
Pool IDPool-250422Pool-250422
LocalServer_folder
total_reads00
total_aligned_reads00
unique_aligned_reads00
percent_uniqueAligned
correlation_replicates
spikein_reads00
percent_spikeins
original_ReadLength
QC_StatusReadyToQCReadyToQC
ID34173418




Data Submission Information
DCC submission information was not avaliable




File Information
Files of the experiment was not avaliable in the database