non-target      CRISPR in HepG2      Batch: BGHcLV47

General Information

List KD experiments controlled by BGHcLV47-1 and BGHcLV47-2


NT-BGHcLV47-1,NT-BGHcLV47-2:No KD experiments controlled by NT-BGHcLV47-1 and NT-BGHcLV47-2 are available on the database




Experiment Information (Status: Sequenced)
BGHcLV47-1BGHcLV47-2
idx00
TRCN#_or_BGC#
shRNA_or_gRNA_sequence
PAM
Namenon-targetnon-target
Sample_IDBGHcLV47-1BGHcLV47-2
transduction_Date1/28/251/28/25
daysD6D6
RBP_namenon-targetnon-target
qPCR_result
Ave_qPCR
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc04277
WB_result
Ave_WB
WB_DONE_date
MW
IP
antibody_Cat#
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM00
Rep2_TPM00
ActionReadyReady
Library_start_date
repeat_library
Note
ID97889789




Western Blot
Western Blot info was not avaliable




Experiment Status
BGHcLV47-1BGHcLV47-2
Sample_IDBGHcLV47-1BGHcLV47-2
Sample Name
Sample NameNT-BGHcLV47-1NT-BGHcLV47-2
RBPnon-targetnon-target
Cell_LineHepG2HepG2
Exp UID
StatusSequencedSequenced
Status_date2025-05-142025-05-14
ProjectENCORE2ENCORE2
Note
ID1414814149




Library-Prep Information
BGHcLV47-1BGHcLV47-2
Sample #12
Sample NameNT-BGHcLV47-1NT-BGHcLV47-2
Sample_Name_Alias
Index Well PositionA08B08
Index_tableIDT_UniqueDualIndex_96_V2IDT_UniqueDualIndex_96_V2
LibPrep_date2025-04-232025-04-23
Lib_IDLib-250423Lib-250423
Tecan_Location
Tecan
Tecan_date
Size_bp258260
Peak_Molarity41.2046.50
libSampleQC_DNA_Well
RIN
libSample_RNA_Well
SampleQC_methodTapeStation_2022TapeStation_2022
SampleQC_date2025-04-222025-04-22
Sample_IDBGHcLV47-1BGHcLV47-2
RBPNTNT
Batch_IDBGHcLV47BGHcLV47
WB_result0.0000.000
Library DescriptionTruSeq mRNATruSeq mRNA
Repeat_Library_Suffix
Lib_StatusSendToSequenceSendToSequence
ProjectENCORE2ENCORE2
ID47124713




Sequencing Information
BGHcLV47-1BGHcLV47-2
Sample_IDBGHcLV47-1BGHcLV47-2
Sample NameNT-BGHcLV47-1NT-BGHcLV47-2
Pool IDPool-250422Pool-250422
LocalServer_folder
total_reads00
total_aligned_reads00
unique_aligned_reads00
percent_uniqueAligned
correlation_replicates
spikein_reads00
percent_spikeins
original_ReadLength
QC_StatusReadyToQCReadyToQC
ID34153416




Data Submission Information
DCC submission information was not avaliable




File Information
Files of the experiment was not avaliable in the database