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RYBP
CRISPR
in HepG2
Control:
NT-BGHcLV20
General Information
Experiment Information
Sequencing Information
Data Submission
Files
General Information
RBP
RYBP
Cell_Line
HepG2
Method
CRISPR
Exp_Name
RYBP-BGHcLV20-HepG2
ENCODE_series_ID
ENCSR542UKE
Batch_ID
BGHcLV20
Pool ID
Pool-200928
Local_Set_Name
set45_H
ENCODE_KD_Exp_ID
ENCSR439TMT
ENCODE_CN_Exp_ID
ENCSR306EWE
Rep1
RYBP-BGHcLV20-31
Rep2
RYBP-BGHcLV20-32
CN1
NT-BGHcLV20-1
CN2
NT-BGHcLV20-2
Rep1_qPCR
22.0
Rep2_qPCR
11.0
Rep1_WB
87.0
Rep2_WB
86.9
Antibody Cat#
PA5-19943
Antibody Lot#
LOT# UF2796583
Antibody DCC ID
ENCAB686SDS
Status
Released
Project
ENCODE4
ID
80
Experiment Information
Western Blot
Experiment Status
Experiment Information (Status:
NotSatisfied
)
BGHcLV20-33
BGHcLV20-34
idx
583
584
TRCN#_or_BGC#
BGC#0000490
BGC#0000490
shRNA_or_gRNA_sequence
ACCAGCTGAGAATTGATCCG
ACCAGCTGAGAATTGATCCG
PAM
AGG
AGG
Name
RYBP_93
RYBP_93
Sample_ID
BGHcLV20-33
BGHcLV20-34
transduction_Date
12/10/19
12/10/19
days
D6
D6
RBP_name
RYBP
RYBP
qPCR_result
97.0
97.0
Ave_qPCR
97.0
RT-qPCR_primer-F
GGATTGTAGCGTCTGCACCT
RT-qPCR_primer-R
ACCAGCTGAGAATTGATCCG
protein_conc
4303
4765
WB_result
84.2
81.9
Ave_WB
83.1
WB_DONE_date
7/31/20
MW
24.8kDa
IP
Rabbit / I
antibody_Cat#
PA5-19943
LOT# UF2796583
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM
0
0
Rep2_TPM
0
0
Action
Library_start_date
repeat_library
Note
ID
6738
6739
Western Blot
Western Blot info was not avaliable
Experiment Status
BGHcLV20-33
BGHcLV20-34
Sample_ID
BGHcLV20-33
BGHcLV20-34
Sample Name
Sample Name
RBP
RYBP
RYBP
Cell_Line
HepG2
HepG2
Exp UID
Status
NotSatisfied
NotSatisfied
Status_date
2020-09-20
2020-09-20
Project
ENCODE4
ENCODE4
Note
ID
5843
5844
Library-Prep
Sequencing
Library-Prep Information
Library info was not avaliable
Sequencing Information
Sequencing info was not avaliable
Data Submission Information
DCC submission information was not avaliable
File Information
Files of the experiment was not avaliable in the database
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