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CSTF2T
shRNA
in 293T
Batch: BG293LV06
Experiment Information
Sequencing Information
Data Submission
Files
Experiment Information
Western Blot
Experiment Status
Experiment Information (Status:
Sequenced
)
BG293LV06-97
BG293LV06-98
idx
0
0
TRCN#_or_BGC#
TRCN0000145349
TRCN0000145349
shRNA_or_gRNA_sequence
GCGTCTGTTCACTTTAAGTTACTCGAGTAACTTAAAGTGAACAGACGC
GCGTCTGTTCACTTTAAGTTACTCGAGTAACTTAAAGTGAACAGACGC
PAM
Name
CSTF2T
CSTF2T
Sample_ID
BG293LV06-97
BG293LV06-98
transduction_Date
9/5/24
9/5/24
days
D4
D4
RBP_name
CSTF2T
CSTF2T
qPCR_result
53.4
58.9
Ave_qPCR
56.2
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc
0
0
WB_result
Ave_WB
WB_DONE_date
MW
IP
antibody_Cat#
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM
0
0
Rep2_TPM
0
0
Action
Ready
Ready
Library_start_date
repeat_library
Note
ID
10184
10185
Western Blot
Western Blot info was not avaliable
Experiment Status
BG293LV06-97
BG293LV06-98
Sample_ID
BG293LV06-97
BG293LV06-98
Sample Name
Sample Name
CSTF2T-BG293LV06-97B
CSTF2T-BG293LV06-98B
RBP
CSTF2T
CSTF2T
Cell_Line
293T
293T
Exp UID
Status
Sequenced
Sequenced
Status_date
2024-10-16
2024-10-16
Project
ENCORE2
ENCORE2
Note
ID
13534
13535
Library-Prep
Sequencing
Library-Prep Information
BG293LV06-97
BG293LV06-98
Sample #
97
98
Sample Name
CSTF2T-BG293LV06-97B
CSTF2T-BG293LV06-98B
Sample_Name_Alias
Index Well Position
A06
B06
Index_table
IDT_UniqueDualIndex_96_V2
IDT_UniqueDualIndex_96_V2
LibPrep_date
2024-10-02
2024-10-02
Lib_ID
Lib-241002
Lib-241002
Tecan_Location
Tecan
Tecan_date
Size_bp
301
285
Peak_Molarity
99.40
85.10
libSampleQC_DNA_Well
DNA_Library_set72/set1/A6.png
DNA_Library_set72/set1/B6.png
RIN
10.0
10.0
libSample_RNA_Well
RNA_Library_set72/set1/A6.png
RNA_Library_set72/set1/B6.png
SampleQC_method
TapeStation_2022
TapeStation_2022
SampleQC_date
2024-10-04
2024-10-04
Sample_ID
BG293LV06-97
BG293LV06-98
RBP
CSTF2T
CSTF2T
Batch_ID
BG293LV06
BG293LV06
WB_result
0.000
0.000
Library Description
TruSeq mRNA
TruSeq mRNA
Repeat_Library_Suffix
B
B
Lib_Status
SendToSequence
SendToSequence
Project
ENCORE2
ENCORE2
ID
4522
4523
Sequencing Information
BG293LV06-97
BG293LV06-98
Sample_ID
BG293LV06-97
BG293LV06-98
Sample Name
CSTF2T-BG293LV06-97B
CSTF2T-BG293LV06-98B
Pool ID
Pool-241004
Pool-241004
LocalServer_folder
set72
set72
total_reads
22,746,326
24,159,084
total_aligned_reads
21,105,378
22,470,968
unique_aligned_reads
19,732,168
21,060,478
percent_uniqueAligned
0.86749
0.87174
correlation_replicates
0.984214
0.984214
spikein_reads
94,042
108,718
percent_spikeins
0.00413
0.00450
original_ReadLength
101
101
QC_Status
ReadyToSubmit
ReadyToSubmit
ID
3091
3092
Data Submission Information
DCC submission information was not avaliable
File Information
Files of the experiment was not avaliable in the database
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