Home
NEWS
Summary
Data Files
Search
FAQ
Admin Login
Top
EIF4H
shRNA
in 293T
Batch: BG293LV06
Experiment Information
Sequencing Information
Data Submission
Files
Experiment Information
Western Blot
Experiment Status
Experiment Information (Status:
Sequenced
)
BG293LV06-93
BG293LV06-94
idx
0
0
TRCN#_or_BGC#
TRCN0000275601
TRCN0000275601
shRNA_or_gRNA_sequence
CCGGGAGTGCATGTCAGCTGTTAACCTCGAGGTTAACAGCTGACATGCACTCTTTTTG
CCGGGAGTGCATGTCAGCTGTTAACCTCGAGGTTAACAGCTGACATGCACTCTTTTTG
PAM
Name
EIF4H
EIF4H
Sample_ID
BG293LV06-93
BG293LV06-94
transduction_Date
9/5/24
9/5/24
days
D4
D4
RBP_name
EIF4H
EIF4H
qPCR_result
90.9
83.7
Ave_qPCR
87.3
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc
0
0
WB_result
Ave_WB
WB_DONE_date
MW
IP
antibody_Cat#
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM
0
0
Rep2_TPM
0
0
Action
Ready
Ready
Library_start_date
repeat_library
Note
ID
10180
10181
Western Blot
Western Blot info was not avaliable
Experiment Status
BG293LV06-93
BG293LV06-94
Sample_ID
BG293LV06-93
BG293LV06-94
Sample Name
Sample Name
EIF4H-BG293LV06-93B
EIF4H-BG293LV06-94B
RBP
EIF4H
EIF4H
Cell_Line
293T
293T
Exp UID
Status
Sequenced
Sequenced
Status_date
2024-10-16
2024-10-16
Project
ENCORE2
ENCORE2
Note
ID
13530
13531
Library-Prep
Sequencing
Library-Prep Information
BG293LV06-93
BG293LV06-94
Sample #
93
94
Sample Name
EIF4H-BG293LV06-93B
EIF4H-BG293LV06-94B
Sample_Name_Alias
Index Well Position
E05
F05
Index_table
IDT_UniqueDualIndex_96_V2
IDT_UniqueDualIndex_96_V2
LibPrep_date
2024-10-02
2024-10-02
Lib_ID
Lib-241002
Lib-241002
Tecan_Location
Tecan
Tecan_date
Size_bp
273
277
Peak_Molarity
76.30
87.70
libSampleQC_DNA_Well
DNA_Library_set72/set1/E5.png
DNA_Library_set72/set1/F5.png
RIN
9.7
9.8
libSample_RNA_Well
RNA_Library_set72/set1/E5.png
RNA_Library_set72/set1/F5.png
SampleQC_method
TapeStation_2022
TapeStation_2022
SampleQC_date
2024-10-04
2024-10-04
Sample_ID
BG293LV06-93
BG293LV06-94
RBP
EIF4H
EIF4H
Batch_ID
BG293LV06
BG293LV06
WB_result
0.000
0.000
Library Description
TruSeq mRNA
TruSeq mRNA
Repeat_Library_Suffix
B
B
Lib_Status
SendToSequence
SendToSequence
Project
ENCORE2
ENCORE2
ID
4518
4519
Sequencing Information
BG293LV06-93
BG293LV06-94
Sample_ID
BG293LV06-93
BG293LV06-94
Sample Name
EIF4H-BG293LV06-93B
EIF4H-BG293LV06-94B
Pool ID
Pool-241004
Pool-241004
LocalServer_folder
set72
set72
total_reads
18,508,773
26,701,083
total_aligned_reads
16,253,206
23,015,108
unique_aligned_reads
15,190,850
21,587,135
percent_uniqueAligned
0.82074
0.80847
correlation_replicates
0.991686
0.991686
spikein_reads
54,802
83,752
percent_spikeins
0.00296
0.00314
original_ReadLength
101
101
QC_Status
ReadyToSubmit
ReadyToSubmit
ID
3087
3088
Data Submission Information
DCC submission information was not avaliable
File Information
Files of the experiment was not avaliable in the database
Back