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WDR6
shRNA
in 293T
Batch: BG293LV06
Experiment Information
Sequencing Information
Data Submission
Files
Experiment Information
Western Blot
Experiment Status
Experiment Information (Status:
Sequenced
)
BG293LV06-89
BG293LV06-90
idx
0
0
TRCN#_or_BGC#
TRCN0000353745
TRCN0000353745
shRNA_or_gRNA_sequence
CCGGCAATCGGCATCGGATGGTTAACTCGAGTTAACCATCCGATGCCGATTGTTTTTG
CCGGCAATCGGCATCGGATGGTTAACTCGAGTTAACCATCCGATGCCGATTGTTTTTG
PAM
Name
WDR6
WDR6
Sample_ID
BG293LV06-89
BG293LV06-90
transduction_Date
9/5/24
9/5/24
days
D4
D4
RBP_name
WDR6
WDR6
qPCR_result
69.2
72.6
Ave_qPCR
70.9
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc
0
0
WB_result
Ave_WB
WB_DONE_date
MW
IP
antibody_Cat#
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM
0
0
Rep2_TPM
0
0
Action
Ready
Ready
Library_start_date
repeat_library
Note
ID
10176
10177
Western Blot
Western Blot info was not avaliable
Experiment Status
BG293LV06-89
BG293LV06-90
Sample_ID
BG293LV06-89
BG293LV06-90
Sample Name
Sample Name
WDR6-BG293LV06-89B
WDR6-BG293LV06-90B
RBP
WDR6
WDR6
Cell_Line
293T
293T
Exp UID
Status
Sequenced
Sequenced
Status_date
2024-10-16
2024-10-16
Project
ENCORE2
ENCORE2
Note
ID
13526
13527
Library-Prep
Sequencing
Library-Prep Information
BG293LV06-89
BG293LV06-90
Sample #
89
90
Sample Name
WDR6-BG293LV06-89B
WDR6-BG293LV06-90B
Sample_Name_Alias
Index Well Position
A05
B05
Index_table
IDT_UniqueDualIndex_96_V2
IDT_UniqueDualIndex_96_V2
LibPrep_date
2024-10-02
2024-10-02
Lib_ID
Lib-241002
Lib-241002
Tecan_Location
Tecan
Tecan_date
Size_bp
273
277
Peak_Molarity
105.00
91.60
libSampleQC_DNA_Well
DNA_Library_set72/set1/A5.png
DNA_Library_set72/set1/B5.png
RIN
10.0
9.8
libSample_RNA_Well
RNA_Library_set72/set1/A5.png
RNA_Library_set72/set1/B5.png
SampleQC_method
TapeStation_2022
TapeStation_2022
SampleQC_date
2024-10-04
2024-10-04
Sample_ID
BG293LV06-89
BG293LV06-90
RBP
WDR6
WDR6
Batch_ID
BG293LV06
BG293LV06
WB_result
0.000
0.000
Library Description
TruSeq mRNA
TruSeq mRNA
Repeat_Library_Suffix
B
B
Lib_Status
SendToSequence
SendToSequence
Project
ENCORE2
ENCORE2
ID
4514
4515
Sequencing Information
BG293LV06-89
BG293LV06-90
Sample_ID
BG293LV06-89
BG293LV06-90
Sample Name
WDR6-BG293LV06-89B
WDR6-BG293LV06-90B
Pool ID
Pool-241004
Pool-241004
LocalServer_folder
set72
set72
total_reads
25,969,173
36,489,963
total_aligned_reads
23,421,278
32,709,436
unique_aligned_reads
21,892,316
30,638,153
percent_uniqueAligned
0.84301
0.83963
correlation_replicates
0.981294
0.981294
spikein_reads
111,982
186,382
percent_spikeins
0.00431
0.00511
original_ReadLength
101
101
QC_Status
ReadyToSubmit
ReadyToSubmit
ID
3083
3084
Data Submission Information
DCC submission information was not avaliable
File Information
Files of the experiment was not avaliable in the database
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