STAU2      shRNA in 293T      Batch: BG293LV06

Experiment Information (Status: Sequenced)
BG293LV06-81BG293LV06-82
idx00
TRCN#_or_BGC#TRCN0000157149TRCN0000157149
shRNA_or_gRNA_sequenceCCGGGCCAGGGAACTCCTTATGAATCTCGAGATTCATAAGGAGTTCCCTGGCTTTTTTGCCGGGCCAGGGAACTCCTTATGAATCTCGAGATTCATAAGGAGTTCCCTGGCTTTTTTG
PAM
NameSTAU2STAU2
Sample_IDBG293LV06-81BG293LV06-82
transduction_Date9/5/249/5/24
daysD4D4
RBP_nameSTAU2STAU2
qPCR_result75.886.7
Ave_qPCR81.2
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc00
WB_result
Ave_WB
WB_DONE_date
MW
IP
antibody_Cat#
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM00
Rep2_TPM00
ActionReadyReady
Library_start_date
repeat_library
Note
ID1016810169




Western Blot
Western Blot info was not avaliable




Experiment Status
BG293LV06-81BG293LV06-82
Sample_IDBG293LV06-81BG293LV06-82
Sample Name
Sample NameSTAU2-BG293LV06-81BSTAU2-BG293LV06-82B
RBPSTAU2STAU2
Cell_Line293T293T
Exp UID
StatusSequencedSequenced
Status_date2024-10-162024-10-16
ProjectENCORE2ENCORE2
Note
ID1351813519




Library-Prep Information
BG293LV06-81BG293LV06-82
Sample #8182
Sample NameSTAU2-BG293LV06-81BSTAU2-BG293LV06-82B
Sample_Name_Alias
Index Well PositionA04B04
Index_tableIDT_UniqueDualIndex_96_V2IDT_UniqueDualIndex_96_V2
LibPrep_date2024-10-022024-10-02
Lib_IDLib-241002Lib-241002
Tecan_Location
Tecan
Tecan_date
Size_bp297286
Peak_Molarity82.6096.50
libSampleQC_DNA_WellDNA_Library_set72/set1/A4.pngDNA_Library_set72/set1/B4.png
RIN9.99.9
libSample_RNA_WellRNA_Library_set72/set1/A4.pngRNA_Library_set72/set1/B4.png
SampleQC_methodTapeStation_2022TapeStation_2022
SampleQC_date2024-10-042024-10-04
Sample_IDBG293LV06-81BG293LV06-82
RBPSTAU2STAU2
Batch_IDBG293LV06BG293LV06
WB_result0.0000.000
Library DescriptionTruSeq mRNATruSeq mRNA
Repeat_Library_SuffixBB
Lib_StatusSendToSequenceSendToSequence
ProjectENCORE2ENCORE2
ID45064507




Sequencing Information
BG293LV06-81BG293LV06-82
Sample_IDBG293LV06-81BG293LV06-82
Sample NameSTAU2-BG293LV06-81BSTAU2-BG293LV06-82B
Pool IDPool-241004Pool-241004
LocalServer_folderset72set72
total_reads35,170,40022,564,208
total_aligned_reads32,307,80620,918,733
unique_aligned_reads30,151,29519,664,244
percent_uniqueAligned0.857290.87148
correlation_replicates0.9655100.965510
spikein_reads151,91480,238
percent_spikeins0.004320.00356
original_ReadLength101101
QC_StatusReadyToSubmitReadyToSubmit
ID30753076




Data Submission Information
DCC submission information was not avaliable




File Information
Files of the experiment was not avaliable in the database