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STAU2
shRNA
in 293T
Batch: BG293LV06
Experiment Information
Sequencing Information
Data Submission
Files
Experiment Information
Western Blot
Experiment Status
Experiment Information (Status:
Sequenced
)
BG293LV06-81
BG293LV06-82
idx
0
0
TRCN#_or_BGC#
TRCN0000157149
TRCN0000157149
shRNA_or_gRNA_sequence
CCGGGCCAGGGAACTCCTTATGAATCTCGAGATTCATAAGGAGTTCCCTGGCTTTTTTG
CCGGGCCAGGGAACTCCTTATGAATCTCGAGATTCATAAGGAGTTCCCTGGCTTTTTTG
PAM
Name
STAU2
STAU2
Sample_ID
BG293LV06-81
BG293LV06-82
transduction_Date
9/5/24
9/5/24
days
D4
D4
RBP_name
STAU2
STAU2
qPCR_result
75.8
86.7
Ave_qPCR
81.2
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc
0
0
WB_result
Ave_WB
WB_DONE_date
MW
IP
antibody_Cat#
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM
0
0
Rep2_TPM
0
0
Action
Ready
Ready
Library_start_date
repeat_library
Note
ID
10168
10169
Western Blot
Western Blot info was not avaliable
Experiment Status
BG293LV06-81
BG293LV06-82
Sample_ID
BG293LV06-81
BG293LV06-82
Sample Name
Sample Name
STAU2-BG293LV06-81B
STAU2-BG293LV06-82B
RBP
STAU2
STAU2
Cell_Line
293T
293T
Exp UID
Status
Sequenced
Sequenced
Status_date
2024-10-16
2024-10-16
Project
ENCORE2
ENCORE2
Note
ID
13518
13519
Library-Prep
Sequencing
Library-Prep Information
BG293LV06-81
BG293LV06-82
Sample #
81
82
Sample Name
STAU2-BG293LV06-81B
STAU2-BG293LV06-82B
Sample_Name_Alias
Index Well Position
A04
B04
Index_table
IDT_UniqueDualIndex_96_V2
IDT_UniqueDualIndex_96_V2
LibPrep_date
2024-10-02
2024-10-02
Lib_ID
Lib-241002
Lib-241002
Tecan_Location
Tecan
Tecan_date
Size_bp
297
286
Peak_Molarity
82.60
96.50
libSampleQC_DNA_Well
DNA_Library_set72/set1/A4.png
DNA_Library_set72/set1/B4.png
RIN
9.9
9.9
libSample_RNA_Well
RNA_Library_set72/set1/A4.png
RNA_Library_set72/set1/B4.png
SampleQC_method
TapeStation_2022
TapeStation_2022
SampleQC_date
2024-10-04
2024-10-04
Sample_ID
BG293LV06-81
BG293LV06-82
RBP
STAU2
STAU2
Batch_ID
BG293LV06
BG293LV06
WB_result
0.000
0.000
Library Description
TruSeq mRNA
TruSeq mRNA
Repeat_Library_Suffix
B
B
Lib_Status
SendToSequence
SendToSequence
Project
ENCORE2
ENCORE2
ID
4506
4507
Sequencing Information
BG293LV06-81
BG293LV06-82
Sample_ID
BG293LV06-81
BG293LV06-82
Sample Name
STAU2-BG293LV06-81B
STAU2-BG293LV06-82B
Pool ID
Pool-241004
Pool-241004
LocalServer_folder
set72
set72
total_reads
35,170,400
22,564,208
total_aligned_reads
32,307,806
20,918,733
unique_aligned_reads
30,151,295
19,664,244
percent_uniqueAligned
0.85729
0.87148
correlation_replicates
0.965510
0.965510
spikein_reads
151,914
80,238
percent_spikeins
0.00432
0.00356
original_ReadLength
101
101
QC_Status
ReadyToSubmit
ReadyToSubmit
ID
3075
3076
Data Submission Information
DCC submission information was not avaliable
File Information
Files of the experiment was not avaliable in the database
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