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GRB2
shRNA
in 293T
Batch: BG293LV06
Experiment Information
Sequencing Information
Data Submission
Files
Experiment Information
Western Blot
Experiment Status
Experiment Information (Status:
Sequenced
)
BG293LV06-7
BG293LV06-8
idx
0
0
TRCN#_or_BGC#
TRCN0000029369
TRCN0000029369
shRNA_or_gRNA_sequence
CCGGGCAGAAGAAATGCTTAGCAAACTCGAGTTTGCTAAGCATTTCTTCTGCTTTTT
CCGGGCAGAAGAAATGCTTAGCAAACTCGAGTTTGCTAAGCATTTCTTCTGCTTTTT
PAM
Name
GRB2
GRB2
Sample_ID
BG293LV06-7
BG293LV06-8
transduction_Date
9/5/24
9/5/24
days
D4
D4
RBP_name
GRB2
GRB2
qPCR_result
64.9
53.6
Ave_qPCR
59.3
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc
0
0
WB_result
Ave_WB
WB_DONE_date
MW
IP
antibody_Cat#
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM
0
0
Rep2_TPM
0
0
Action
Ready
Ready
Library_start_date
repeat_library
Note
ID
10094
10095
Western Blot
Western Blot info was not avaliable
Experiment Status
BG293LV06-7
BG293LV06-8
Sample_ID
BG293LV06-7
BG293LV06-8
Sample Name
Sample Name
GRB2-BG293LV06-7
GRB2-BG293LV06-8
RBP
GRB2
GRB2
Cell_Line
293T
293T
Exp UID
Status
Sequenced
Sequenced
Status_date
2024-10-16
2024-10-16
Project
ENCORE2
ENCORE2
Note
ID
13444
13445
Library-Prep
Sequencing
Library-Prep Information
BG293LV06-7
BG293LV06-8
Sample #
11
12
Sample Name
GRB2-BG293LV06-7
GRB2-BG293LV06-8
Sample_Name_Alias
Index Well Position
C02
D02
Index_table
IDT_UniqueDualIndex_96_V2
IDT_UniqueDualIndex_96_V2
LibPrep_date
2024-09-25
2024-09-25
Lib_ID
Lib-240925B
Lib-240925B
Tecan_Location
Tecan
Tecan_date
Size_bp
298
298
Peak_Molarity
88.80
91.90
libSampleQC_DNA_Well
DNA_Library_set71/set1/C2.png
DNA_Library_set71/set1/D2.png
RIN
10.0
9.9
libSample_RNA_Well
RNA_Library_set71/set1/C2.png
RNA_Library_set71/set1/D2.png
SampleQC_method
TapeStation_2022
TapeStation_2022
SampleQC_date
2024-09-30
2024-09-30
Sample_ID
BG293LV06-7
BG293LV06-8
RBP
GRB2
GRB2
Batch_ID
BG293LV06
BG293LV06
WB_result
0.000
0.000
Library Description
TruSeq mRNA
TruSeq mRNA
Repeat_Library_Suffix
Lib_Status
SendToSequence
SendToSequence
Project
ENCORE2
ENCORE2
ID
4436
4437
Sequencing Information
BG293LV06-7
BG293LV06-8
Sample_ID
BG293LV06-7
BG293LV06-8
Sample Name
GRB2-BG293LV06-7
GRB2-BG293LV06-8
Pool ID
Pool-240930
Pool-240930
LocalServer_folder
set71
set71
total_reads
27,074,964
30,502,103
total_aligned_reads
24,875,733
27,768,484
unique_aligned_reads
23,339,976
26,024,753
percent_uniqueAligned
0.86205
0.85321
correlation_replicates
0.988759
0.988759
spikein_reads
78,934
103,282
percent_spikeins
0.00292
0.00339
original_ReadLength
101
101
QC_Status
ReadyToSubmit
ReadyToSubmit
ID
3005
3006
Data Submission Information
DCC submission information was not avaliable
File Information
Files of the experiment was not avaliable in the database
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