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RBM4
shRNA
in 293T
Batch: BG293LV06
Experiment Information
Sequencing Information
Data Submission
Files
Experiment Information
Western Blot
Experiment Status
Experiment Information (Status:
Sequenced
)
BG293LV06-47
BG293LV06-48
idx
0
0
TRCN#_or_BGC#
TRCN0000160719
TRCN0000160719
shRNA_or_gRNA_sequence
CCGGCCTGTTCTTCTGTCCTTCAATCTCGAGATTGAAGGACAGAAGAACAGGTTTTTTG
CCGGCCTGTTCTTCTGTCCTTCAATCTCGAGATTGAAGGACAGAAGAACAGGTTTTTTG
PAM
Name
RBM4
RBM4
Sample_ID
BG293LV06-47
BG293LV06-48
transduction_Date
9/5/24
9/5/24
days
D4
D4
RBP_name
RBM4
RBM4
qPCR_result
85.1
88.6
Ave_qPCR
86.9
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc
0
0
WB_result
Ave_WB
WB_DONE_date
MW
IP
antibody_Cat#
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM
0
0
Rep2_TPM
0
0
Action
Ready
Ready
Library_start_date
repeat_library
Note
ID
10134
10135
Western Blot
Western Blot info was not avaliable
Experiment Status
BG293LV06-47
BG293LV06-48
Sample_ID
BG293LV06-47
BG293LV06-48
Sample Name
Sample Name
RBM4-BG293LV06-47
RBM4-BG293LV06-48
RBP
RBM4
RBM4
Cell_Line
293T
293T
Exp UID
Status
Sequenced
Sequenced
Status_date
2024-10-16
2024-10-16
Project
ENCORE2
ENCORE2
Note
ID
13484
13485
Library-Prep
Sequencing
Library-Prep Information
BG293LV06-47
BG293LV06-48
Sample #
49
50
Sample Name
RBM4-BG293LV06-47
RBM4-BG293LV06-48
Sample_Name_Alias
Index Well Position
A07
B07
Index_table
IDT_UniqueDualIndex_96_V2
IDT_UniqueDualIndex_96_V2
LibPrep_date
2024-09-25
2024-09-25
Lib_ID
Lib-240925B
Lib-240925B
Tecan_Location
Tecan
Tecan_date
Size_bp
277
273
Peak_Molarity
84.20
89.10
libSampleQC_DNA_Well
DNA_Library_set71/set1/A7.png
DNA_Library_set71/set1/B7.png
RIN
9.9
9.9
libSample_RNA_Well
RNA_Library_set71/set1/A7.png
RNA_Library_set71/set1/B7.png
SampleQC_method
TapeStation_2022
TapeStation_2022
SampleQC_date
2024-09-30
2024-09-30
Sample_ID
BG293LV06-47
BG293LV06-48
RBP
RBM4
RBM4
Batch_ID
BG293LV06
BG293LV06
WB_result
0.000
0.000
Library Description
TruSeq mRNA
TruSeq mRNA
Repeat_Library_Suffix
Lib_Status
SendToSequence
SendToSequence
Project
ENCORE2
ENCORE2
ID
4474
4475
Sequencing Information
BG293LV06-47
BG293LV06-48
Sample_ID
BG293LV06-47
BG293LV06-48
Sample Name
RBM4-BG293LV06-47
RBM4-BG293LV06-48
Pool ID
Pool-240930
Pool-240930
LocalServer_folder
set71
set71
total_reads
46,847,362
39,684,737
total_aligned_reads
43,665,857
36,370,630
unique_aligned_reads
40,998,159
34,030,574
percent_uniqueAligned
0.87514
0.85752
correlation_replicates
0.995438
0.995438
spikein_reads
171,628
113,068
percent_spikeins
0.00366
0.00285
original_ReadLength
101
101
QC_Status
ReadyToSubmit
ReadyToSubmit
ID
3043
3044
Data Submission Information
DCC submission information was not avaliable
File Information
Files of the experiment was not avaliable in the database
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