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RBM14
shRNA
in 293T
Batch: BG293LV06
Experiment Information
Sequencing Information
Data Submission
Files
Experiment Information
Western Blot
Experiment Status
Experiment Information (Status:
Sequenced
)
BG293LV06-29
BG293LV06-30
idx
0
0
TRCN#_or_BGC#
TRCN0000072693
TRCN0000072693
shRNA_or_gRNA_sequence
CCGGCCCAGGAGATGATCCTGTTAACTCGAGTTAACAGGATCATCTCCTGGGTTTTTG
CCGGCCCAGGAGATGATCCTGTTAACTCGAGTTAACAGGATCATCTCCTGGGTTTTTG
PAM
Name
RBM14
RBM14
Sample_ID
BG293LV06-29
BG293LV06-30
transduction_Date
9/5/24
9/5/24
days
D4
D4
RBP_name
RBM14
RBM14
qPCR_result
65.8
66.6
Ave_qPCR
66.2
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc
0
0
WB_result
Ave_WB
WB_DONE_date
MW
IP
antibody_Cat#
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM
0
0
Rep2_TPM
0
0
Action
Ready
Ready
Library_start_date
repeat_library
Note
ID
10116
10117
Western Blot
Western Blot info was not avaliable
Experiment Status
BG293LV06-29
BG293LV06-30
Sample_ID
BG293LV06-29
BG293LV06-30
Sample Name
Sample Name
RBM14-BG293LV06-29
RBM14-BG293LV06-30
RBP
RBM14
RBM14
Cell_Line
293T
293T
Exp UID
Status
Sequenced
Sequenced
Status_date
2024-10-16
2024-10-16
Project
ENCORE2
ENCORE2
Note
ID
13466
13467
Library-Prep
Sequencing
Library-Prep Information
BG293LV06-29
BG293LV06-30
Sample #
33
34
Sample Name
RBM14-BG293LV06-29
RBM14-BG293LV06-30
Sample_Name_Alias
Index Well Position
A05
B05
Index_table
IDT_UniqueDualIndex_96_V2
IDT_UniqueDualIndex_96_V2
LibPrep_date
2024-09-25
2024-09-25
Lib_ID
Lib-240925B
Lib-240925B
Tecan_Location
Tecan
Tecan_date
Size_bp
271
279
Peak_Molarity
74.80
106.00
libSampleQC_DNA_Well
DNA_Library_set71/set1/A5.png
DNA_Library_set71/set1/B5.png
RIN
10.0
10.0
libSample_RNA_Well
RNA_Library_set71/set1/A5.png
RNA_Library_set71/set1/B5.png
SampleQC_method
TapeStation_2022
TapeStation_2022
SampleQC_date
2024-09-30
2024-09-30
Sample_ID
BG293LV06-29
BG293LV06-30
RBP
RBM14
RBM14
Batch_ID
BG293LV06
BG293LV06
WB_result
0.000
0.000
Library Description
TruSeq mRNA
TruSeq mRNA
Repeat_Library_Suffix
Lib_Status
SendToSequence
SendToSequence
Project
ENCORE2
ENCORE2
ID
4458
4459
Sequencing Information
BG293LV06-29
BG293LV06-30
Sample_ID
BG293LV06-29
BG293LV06-30
Sample Name
RBM14-BG293LV06-29
RBM14-BG293LV06-30
Pool ID
Pool-240930
Pool-240930
LocalServer_folder
set71
set71
total_reads
31,744,250
26,283,782
total_aligned_reads
28,496,697
23,597,903
unique_aligned_reads
26,583,906
22,131,162
percent_uniqueAligned
0.83744
0.84201
correlation_replicates
0.967588
0.967588
spikein_reads
142,030
80,956
percent_spikeins
0.00447
0.00308
original_ReadLength
101
101
QC_Status
ReadyToSubmit
ReadyToSubmit
ID
3027
3028
Data Submission Information
DCC submission information was not avaliable
File Information
Files of the experiment was not avaliable in the database
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