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RBM10
shRNA
in 293T
Batch: BG293LV06
Experiment Information
Sequencing Information
Data Submission
Files
Experiment Information
Western Blot
Experiment Status
Experiment Information (Status:
Sequenced
)
BG293LV06-19
BG293LV06-20
idx
0
0
TRCN#_or_BGC#
TRCN0000233278
TRCN0000233278
shRNA_or_gRNA_sequence
CCGGTCCAACGTGCGCGTCATAAAGCTCGAGCTTTATGACGCGCACGTTGGATTTTTG
CCGGTCCAACGTGCGCGTCATAAAGCTCGAGCTTTATGACGCGCACGTTGGATTTTTG
PAM
Name
RBM10
RBM10
Sample_ID
BG293LV06-19
BG293LV06-20
transduction_Date
9/5/24
9/5/24
days
D4
D4
RBP_name
RBM10
RBM10
qPCR_result
50.7
60.0
Ave_qPCR
55.4
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc
0
0
WB_result
Ave_WB
WB_DONE_date
MW
IP
antibody_Cat#
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM
0
0
Rep2_TPM
0
0
Action
Ready
Ready
Library_start_date
repeat_library
Note
ID
10106
10107
Western Blot
Western Blot info was not avaliable
Experiment Status
BG293LV06-19
BG293LV06-20
Sample_ID
BG293LV06-19
BG293LV06-20
Sample Name
Sample Name
RBM10-BG293LV06-19
RBM10-BG293LV06-20
RBP
RBM10
RBM10
Cell_Line
293T
293T
Exp UID
Status
Sequenced
Sequenced
Status_date
2024-10-16
2024-10-16
Project
ENCORE2
ENCORE2
Note
ID
13456
13457
Library-Prep
Sequencing
Library-Prep Information
BG293LV06-19
BG293LV06-20
Sample #
23
24
Sample Name
RBM10-BG293LV06-19
RBM10-BG293LV06-20
Sample_Name_Alias
Index Well Position
G03
H03
Index_table
IDT_UniqueDualIndex_96_V2
IDT_UniqueDualIndex_96_V2
LibPrep_date
2024-09-25
2024-09-25
Lib_ID
Lib-240925B
Lib-240925B
Tecan_Location
Tecan
Tecan_date
Size_bp
275
269
Peak_Molarity
77.90
70.40
libSampleQC_DNA_Well
DNA_Library_set71/set1/G3.png
DNA_Library_set71/set1/H3.png
RIN
9.9
9.9
libSample_RNA_Well
RNA_Library_set71/set1/G3.png
RNA_Library_set71/set1/H3.png
SampleQC_method
TapeStation_2022
TapeStation_2022
SampleQC_date
2024-09-30
2024-09-30
Sample_ID
BG293LV06-19
BG293LV06-20
RBP
RBM10
RBM10
Batch_ID
BG293LV06
BG293LV06
WB_result
0.000
0.000
Library Description
TruSeq mRNA
TruSeq mRNA
Repeat_Library_Suffix
Lib_Status
SendToSequence
SendToSequence
Project
ENCORE2
ENCORE2
ID
4448
4449
Sequencing Information
BG293LV06-19
BG293LV06-20
Sample_ID
BG293LV06-19
BG293LV06-20
Sample Name
RBM10-BG293LV06-19
RBM10-BG293LV06-20
Pool ID
Pool-240930
Pool-240930
LocalServer_folder
set71
set71
total_reads
48,134,527
25,193,586
total_aligned_reads
43,603,708
20,539,687
unique_aligned_reads
40,740,866
19,194,621
percent_uniqueAligned
0.84640
0.76189
correlation_replicates
0.992130
0.992130
spikein_reads
122,260
78,094
percent_spikeins
0.00254
0.00310
original_ReadLength
101
101
QC_Status
ReadyToSubmit
ReadyToSubmit
ID
3017
3018
Data Submission Information
DCC submission information was not avaliable
File Information
Files of the experiment was not avaliable in the database
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