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EIF4B
shRNA
in 293T
Batch: BG293LV06
Experiment Information
Sequencing Information
Data Submission
Files
Experiment Information
Western Blot
Experiment Status
Experiment Information (Status:
Sequenced
)
BG293LV06-15
BG293LV06-16
idx
0
0
TRCN#_or_BGC#
TRCN0000062598
TRCN0000062598
shRNA_or_gRNA_sequence
GCGGAGAAACACCTTGATCTTCTCGAGAAGATCAAGGTGTTTCTCCGC
GCGGAGAAACACCTTGATCTTCTCGAGAAGATCAAGGTGTTTCTCCGC
PAM
Name
EIF4B
EIF4B
Sample_ID
BG293LV06-15
BG293LV06-16
transduction_Date
9/5/24
9/5/24
days
D4
D4
RBP_name
EIF4B
EIF4B
qPCR_result
69.5
70.1
Ave_qPCR
69.8
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc
0
0
WB_result
Ave_WB
WB_DONE_date
MW
IP
antibody_Cat#
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM
0
0
Rep2_TPM
0
0
Action
Ready
Ready
Library_start_date
repeat_library
Note
ID
10102
10103
Western Blot
Western Blot info was not avaliable
Experiment Status
BG293LV06-15
BG293LV06-16
Sample_ID
BG293LV06-15
BG293LV06-16
Sample Name
Sample Name
EIF4B-BG293LV06-15
EIF4B-BG293LV06-16
RBP
EIF4B
EIF4B
Cell_Line
293T
293T
Exp UID
Status
Sequenced
Sequenced
Status_date
2024-10-16
2024-10-16
Project
ENCORE2
ENCORE2
Note
ID
13452
13453
Library-Prep
Sequencing
Library-Prep Information
BG293LV06-15
BG293LV06-16
Sample #
19
20
Sample Name
EIF4B-BG293LV06-15
EIF4B-BG293LV06-16
Sample_Name_Alias
Index Well Position
C03
D03
Index_table
IDT_UniqueDualIndex_96_V2
IDT_UniqueDualIndex_96_V2
LibPrep_date
2024-09-25
2024-09-25
Lib_ID
Lib-240925B
Lib-240925B
Tecan_Location
Tecan
Tecan_date
Size_bp
272
279
Peak_Molarity
115.00
87.90
libSampleQC_DNA_Well
DNA_Library_set71/set1/C3.png
DNA_Library_set71/set1/D3.png
RIN
10.0
9.9
libSample_RNA_Well
RNA_Library_set71/set1/C3.png
RNA_Library_set71/set1/D3.png
SampleQC_method
TapeStation_2022
TapeStation_2022
SampleQC_date
2024-09-30
2024-09-30
Sample_ID
BG293LV06-15
BG293LV06-16
RBP
EIF4B
EIF4B
Batch_ID
BG293LV06
BG293LV06
WB_result
0.000
0.000
Library Description
TruSeq mRNA
TruSeq mRNA
Repeat_Library_Suffix
Lib_Status
SendToSequence
SendToSequence
Project
ENCORE2
ENCORE2
ID
4444
4445
Sequencing Information
BG293LV06-15
BG293LV06-16
Sample_ID
BG293LV06-15
BG293LV06-16
Sample Name
EIF4B-BG293LV06-15
EIF4B-BG293LV06-16
Pool ID
Pool-240930
Pool-240930
LocalServer_folder
set71
set71
total_reads
37,512,035
28,800,798
total_aligned_reads
33,215,527
26,220,017
unique_aligned_reads
31,101,819
24,478,746
percent_uniqueAligned
0.82912
0.84993
correlation_replicates
0.978257
0.978257
spikein_reads
96,088
78,920
percent_spikeins
0.00256
0.00274
original_ReadLength
101
101
QC_Status
ReadyToSubmit
ReadyToSubmit
ID
3013
3014
Data Submission Information
DCC submission information was not avaliable
File Information
Files of the experiment was not avaliable in the database
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