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MBNL2
shRNA
in 293T
Batch: BG293LV06
Experiment Information
Sequencing Information
Data Submission
Files
Experiment Information
Western Blot
Experiment Status
Experiment Information (Status:
Sequenced
)
BG293LV06-13
BG293LV06-14
idx
0
0
TRCN#_or_BGC#
TRCN0000180132
TRCN0000180132
shRNA_or_gRNA_sequence
CCGGCGGCTATTAGCTTTGCTCCTTCTCGAGAAGGAGCAAAGCTAATAGCCGTTTTTTG
CCGGCGGCTATTAGCTTTGCTCCTTCTCGAGAAGGAGCAAAGCTAATAGCCGTTTTTTG
PAM
Name
MBNL2
MBNL2
Sample_ID
BG293LV06-13
BG293LV06-14
transduction_Date
9/5/24
9/5/24
days
D4
D4
RBP_name
MBNL2
MBNL2
qPCR_result
92.6
93.0
Ave_qPCR
92.8
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc
0
0
WB_result
Ave_WB
WB_DONE_date
MW
IP
antibody_Cat#
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM
0
0
Rep2_TPM
0
0
Action
Ready
Ready
Library_start_date
repeat_library
Note
ID
10100
10101
Western Blot
Western Blot info was not avaliable
Experiment Status
BG293LV06-13
BG293LV06-14
Sample_ID
BG293LV06-13
BG293LV06-14
Sample Name
Sample Name
MBNL2-BG293LV06-13
MBNL2-BG293LV06-14
RBP
MBNL2
MBNL2
Cell_Line
293T
293T
Exp UID
Status
Sequenced
Sequenced
Status_date
2024-10-16
2024-10-16
Project
ENCORE2
ENCORE2
Note
ID
13450
13451
Library-Prep
Sequencing
Library-Prep Information
BG293LV06-13
BG293LV06-14
Sample #
17
18
Sample Name
MBNL2-BG293LV06-13
MBNL2-BG293LV06-14
Sample_Name_Alias
Index Well Position
A03
B03
Index_table
IDT_UniqueDualIndex_96_V2
IDT_UniqueDualIndex_96_V2
LibPrep_date
2024-09-25
2024-09-25
Lib_ID
Lib-240925B
Lib-240925B
Tecan_Location
Tecan
Tecan_date
Size_bp
287
283
Peak_Molarity
77.70
78.80
libSampleQC_DNA_Well
DNA_Library_set71/set1/A3.png
DNA_Library_set71/set1/B3.png
RIN
9.9
9.9
libSample_RNA_Well
RNA_Library_set71/set1/A3.png
RNA_Library_set71/set1/B3.png
SampleQC_method
TapeStation_2022
TapeStation_2022
SampleQC_date
2024-09-30
2024-09-30
Sample_ID
BG293LV06-13
BG293LV06-14
RBP
MBNL2
MBNL2
Batch_ID
BG293LV06
BG293LV06
WB_result
0.000
0.000
Library Description
TruSeq mRNA
TruSeq mRNA
Repeat_Library_Suffix
Lib_Status
SendToSequence
SendToSequence
Project
ENCORE2
ENCORE2
ID
4442
4443
Sequencing Information
BG293LV06-13
BG293LV06-14
Sample_ID
BG293LV06-13
BG293LV06-14
Sample Name
MBNL2-BG293LV06-13
MBNL2-BG293LV06-14
Pool ID
Pool-240930
Pool-240930
LocalServer_folder
set71
set71
total_reads
29,456,082
31,936,624
total_aligned_reads
25,942,717
28,842,684
unique_aligned_reads
24,252,455
26,968,022
percent_uniqueAligned
0.82334
0.84442
correlation_replicates
0.997185
0.997185
spikein_reads
99,956
91,064
percent_spikeins
0.00339
0.00285
original_ReadLength
101
101
QC_Status
ReadyToSubmit
ReadyToSubmit
ID
3011
3012
Data Submission Information
DCC submission information was not avaliable
File Information
Files of the experiment was not avaliable in the database
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