HNRNPH1      shRNA in 293T      Batch: BG293LV06

Experiment Information (Status: Sequenced)
BG293LV06-125BG293LV06-126
idx00
TRCN#_or_BGC#TRCN0000074596TRCN0000074596
shRNA_or_gRNA_sequenceCCGGCCTGTGAGAGTACACATTGAACTCGAGTTCAATGTGTACTCTCACAGGTTTTTGCCGGCCTGTGAGAGTACACATTGAACTCGAGTTCAATGTGTACTCTCACAGGTTTTTG
PAM
NameHNRNPH1HNRNPH1
Sample_IDBG293LV06-125BG293LV06-126
transduction_Date9/5/249/5/24
daysD4D4
RBP_nameHNRNPH1HNRNPH1
qPCR_result90.190.9
Ave_qPCR90.5
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc00
WB_result
Ave_WB
WB_DONE_date
MW
IP
antibody_Cat#
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM00
Rep2_TPM00
ActionReadyReady
Library_start_date
repeat_library
Note
ID1021210213




Western Blot
Western Blot info was not avaliable




Experiment Status
BG293LV06-125BG293LV06-126
Sample_IDBG293LV06-125BG293LV06-126
Sample Name
Sample NameHNRNPH1-BG293LV06-125BHNRNPH1-BG293LV06-126B
RBPHNRNPH1HNRNPH1
Cell_Line293T293T
Exp UID
StatusSequencedSequenced
Status_date2024-10-162024-10-16
ProjectENCORE2ENCORE2
Note
ID1356213563




Library-Prep Information
BG293LV06-125BG293LV06-126
Sample #125126
Sample NameHNRNPH1-BG293LV06-125BHNRNPH1-BG293LV06-126B
Sample_Name_Alias
Index Well PositionE09F09
Index_tableIDT_UniqueDualIndex_96_V2IDT_UniqueDualIndex_96_V2
LibPrep_date2024-10-022024-10-02
Lib_IDLib-241002Lib-241002
Tecan_Location
Tecan
Tecan_date
Size_bp283279
Peak_Molarity90.9092.00
libSampleQC_DNA_WellDNA_Library_set72/set1/E9.pngDNA_Library_set72/set1/F9.png
RIN9.910.0
libSample_RNA_WellRNA_Library_set72/set1/E9.pngRNA_Library_set72/set1/F9.png
SampleQC_methodTapeStation_2022TapeStation_2022
SampleQC_date2024-10-042024-10-04
Sample_IDBG293LV06-125BG293LV06-126
RBPHNRNPH1HNRNPH1
Batch_IDBG293LV06BG293LV06
WB_result0.0000.000
Library DescriptionTruSeq mRNATruSeq mRNA
Repeat_Library_SuffixBB
Lib_StatusSendToSequenceSendToSequence
ProjectENCORE2ENCORE2
ID45504551




Sequencing Information
BG293LV06-125BG293LV06-126
Sample_IDBG293LV06-125BG293LV06-126
Sample NameHNRNPH1-BG293LV06-125BHNRNPH1-BG293LV06-126B
Pool IDPool-241004Pool-241004
LocalServer_folderset72set72
total_reads35,039,32435,429,325
total_aligned_reads33,353,51033,605,474
unique_aligned_reads31,475,01831,573,832
percent_uniqueAligned0.898280.89118
correlation_replicates0.9964950.996495
spikein_reads104,83082,450
percent_spikeins0.002990.00233
original_ReadLength101101
QC_StatusReadyToSubmitReadyToSubmit
ID31193120




Data Submission Information
DCC submission information was not avaliable




File Information
Files of the experiment was not avaliable in the database