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HNRNPH1
shRNA
in 293T
Batch: BG293LV06
Experiment Information
Sequencing Information
Data Submission
Files
Experiment Information
Western Blot
Experiment Status
Experiment Information (Status:
Sequenced
)
BG293LV06-125
BG293LV06-126
idx
0
0
TRCN#_or_BGC#
TRCN0000074596
TRCN0000074596
shRNA_or_gRNA_sequence
CCGGCCTGTGAGAGTACACATTGAACTCGAGTTCAATGTGTACTCTCACAGGTTTTTG
CCGGCCTGTGAGAGTACACATTGAACTCGAGTTCAATGTGTACTCTCACAGGTTTTTG
PAM
Name
HNRNPH1
HNRNPH1
Sample_ID
BG293LV06-125
BG293LV06-126
transduction_Date
9/5/24
9/5/24
days
D4
D4
RBP_name
HNRNPH1
HNRNPH1
qPCR_result
90.1
90.9
Ave_qPCR
90.5
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc
0
0
WB_result
Ave_WB
WB_DONE_date
MW
IP
antibody_Cat#
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM
0
0
Rep2_TPM
0
0
Action
Ready
Ready
Library_start_date
repeat_library
Note
ID
10212
10213
Western Blot
Western Blot info was not avaliable
Experiment Status
BG293LV06-125
BG293LV06-126
Sample_ID
BG293LV06-125
BG293LV06-126
Sample Name
Sample Name
HNRNPH1-BG293LV06-125B
HNRNPH1-BG293LV06-126B
RBP
HNRNPH1
HNRNPH1
Cell_Line
293T
293T
Exp UID
Status
Sequenced
Sequenced
Status_date
2024-10-16
2024-10-16
Project
ENCORE2
ENCORE2
Note
ID
13562
13563
Library-Prep
Sequencing
Library-Prep Information
BG293LV06-125
BG293LV06-126
Sample #
125
126
Sample Name
HNRNPH1-BG293LV06-125B
HNRNPH1-BG293LV06-126B
Sample_Name_Alias
Index Well Position
E09
F09
Index_table
IDT_UniqueDualIndex_96_V2
IDT_UniqueDualIndex_96_V2
LibPrep_date
2024-10-02
2024-10-02
Lib_ID
Lib-241002
Lib-241002
Tecan_Location
Tecan
Tecan_date
Size_bp
283
279
Peak_Molarity
90.90
92.00
libSampleQC_DNA_Well
DNA_Library_set72/set1/E9.png
DNA_Library_set72/set1/F9.png
RIN
9.9
10.0
libSample_RNA_Well
RNA_Library_set72/set1/E9.png
RNA_Library_set72/set1/F9.png
SampleQC_method
TapeStation_2022
TapeStation_2022
SampleQC_date
2024-10-04
2024-10-04
Sample_ID
BG293LV06-125
BG293LV06-126
RBP
HNRNPH1
HNRNPH1
Batch_ID
BG293LV06
BG293LV06
WB_result
0.000
0.000
Library Description
TruSeq mRNA
TruSeq mRNA
Repeat_Library_Suffix
B
B
Lib_Status
SendToSequence
SendToSequence
Project
ENCORE2
ENCORE2
ID
4550
4551
Sequencing Information
BG293LV06-125
BG293LV06-126
Sample_ID
BG293LV06-125
BG293LV06-126
Sample Name
HNRNPH1-BG293LV06-125B
HNRNPH1-BG293LV06-126B
Pool ID
Pool-241004
Pool-241004
LocalServer_folder
set72
set72
total_reads
35,039,324
35,429,325
total_aligned_reads
33,353,510
33,605,474
unique_aligned_reads
31,475,018
31,573,832
percent_uniqueAligned
0.89828
0.89118
correlation_replicates
0.996495
0.996495
spikein_reads
104,830
82,450
percent_spikeins
0.00299
0.00233
original_ReadLength
101
101
QC_Status
ReadyToSubmit
ReadyToSubmit
ID
3119
3120
Data Submission Information
DCC submission information was not avaliable
File Information
Files of the experiment was not avaliable in the database
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