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TIAL1
shRNA
in 293T
Batch: BG293LV06
Experiment Information
Sequencing Information
Data Submission
Files
Experiment Information
Western Blot
Experiment Status
Experiment Information (Status:
Sequenced
)
BG293LV06-111
BG293LV06-112
idx
0
0
TRCN#_or_BGC#
TRCN0000017211
TRCN0000017211
shRNA_or_gRNA_sequence
CGGATATGGTATGGCAAGTTA
CGGATATGGTATGGCAAGTTA
PAM
Name
TIAL1
TIAL1
Sample_ID
BG293LV06-111
BG293LV06-112
transduction_Date
9/5/24
9/5/24
days
D4
D4
RBP_name
TIAL1
TIAL1
qPCR_result
48.2
53.9
Ave_qPCR
51.0
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc
0
0
WB_result
Ave_WB
WB_DONE_date
MW
IP
antibody_Cat#
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM
0
0
Rep2_TPM
0
0
Action
Ready
Ready
Library_start_date
repeat_library
Note
ID
10198
10199
Western Blot
Western Blot info was not avaliable
Experiment Status
BG293LV06-111
BG293LV06-112
Sample_ID
BG293LV06-111
BG293LV06-112
Sample Name
Sample Name
TIAL1-BG293LV06-111B
TIAL1-BG293LV06-112B
RBP
TIAL1
TIAL1
Cell_Line
293T
293T
Exp UID
Status
Sequenced
Sequenced
Status_date
2024-10-16
2024-10-16
Project
ENCORE2
ENCORE2
Note
ID
13548
13549
Library-Prep
Sequencing
Library-Prep Information
BG293LV06-111
BG293LV06-112
Sample #
111
112
Sample Name
TIAL1-BG293LV06-111B
TIAL1-BG293LV06-112B
Sample_Name_Alias
Index Well Position
G07
H07
Index_table
IDT_UniqueDualIndex_96_V2
IDT_UniqueDualIndex_96_V2
LibPrep_date
2024-10-02
2024-10-02
Lib_ID
Lib-241002
Lib-241002
Tecan_Location
Tecan
Tecan_date
Size_bp
264
270
Peak_Molarity
77.60
55.60
libSampleQC_DNA_Well
DNA_Library_set72/set1/G7.png
DNA_Library_set72/set1/H7.png
RIN
9.8
9.9
libSample_RNA_Well
RNA_Library_set72/set1/G7.png
RNA_Library_set72/set1/H7.png
SampleQC_method
TapeStation_2022
TapeStation_2022
SampleQC_date
2024-10-04
2024-10-04
Sample_ID
BG293LV06-111
BG293LV06-112
RBP
TIAL1
TIAL1
Batch_ID
BG293LV06
BG293LV06
WB_result
0.000
0.000
Library Description
TruSeq mRNA
TruSeq mRNA
Repeat_Library_Suffix
B
B
Lib_Status
SendToSequence
SendToSequence
Project
ENCORE2
ENCORE2
ID
4536
4537
Sequencing Information
BG293LV06-111
BG293LV06-112
Sample_ID
BG293LV06-111
BG293LV06-112
Sample Name
TIAL1-BG293LV06-111B
TIAL1-BG293LV06-112B
Pool ID
Pool-241004
Pool-241004
LocalServer_folder
set72
set72
total_reads
51,768,968
32,134,758
total_aligned_reads
47,821,182
29,431,879
unique_aligned_reads
44,810,244
27,533,893
percent_uniqueAligned
0.86558
0.85683
correlation_replicates
0.994590
0.994590
spikein_reads
126,784
97,380
percent_spikeins
0.00245
0.00303
original_ReadLength
101
101
QC_Status
ReadyToSubmit
ReadyToSubmit
ID
3105
3106
Data Submission Information
DCC submission information was not avaliable
File Information
Files of the experiment was not avaliable in the database
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