Home
NEWS
Summary
Data Files
Search
FAQ
Admin Login
Top
RBM22
shRNA
in 293T
Batch: BG293LV06
Experiment Information
Sequencing Information
Data Submission
Files
Experiment Information
Western Blot
Experiment Status
Experiment Information (Status:
Sequenced
)
BG293LV06-11
BG293LV06-12
idx
0
0
TRCN#_or_BGC#
TRCN0000008650
TRCN0000008650
shRNA_or_gRNA_sequence
ACTGAATGTGAAATCTCGAGATTTCACATTCAGTCTGCGGN
ACTGAATGTGAAATCTCGAGATTTCACATTCAGTCTGCGGN
PAM
Name
RBM22
RBM22
Sample_ID
BG293LV06-11
BG293LV06-12
transduction_Date
9/5/24
9/5/24
days
D4
D4
RBP_name
RBM22
RBM22
qPCR_result
91.0
88.8
Ave_qPCR
89.9
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc
0
0
WB_result
Ave_WB
WB_DONE_date
MW
IP
antibody_Cat#
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM
0
0
Rep2_TPM
0
0
Action
Ready
Ready
Library_start_date
repeat_library
Note
ID
10098
10099
Western Blot
Western Blot info was not avaliable
Experiment Status
BG293LV06-11
BG293LV06-12
Sample_ID
BG293LV06-11
BG293LV06-12
Sample Name
Sample Name
RBM22-BG293LV06-11
RBM22-BG293LV06-12
RBP
RBM22
RBM22
Cell_Line
293T
293T
Exp UID
Status
Sequenced
Sequenced
Status_date
2024-10-16
2024-10-16
Project
ENCORE2
ENCORE2
Note
ID
13448
13449
Library-Prep
Sequencing
Library-Prep Information
BG293LV06-11
BG293LV06-12
Sample #
15
16
Sample Name
RBM22-BG293LV06-11
RBM22-BG293LV06-12
Sample_Name_Alias
Index Well Position
G02
H02
Index_table
IDT_UniqueDualIndex_96_V2
IDT_UniqueDualIndex_96_V2
LibPrep_date
2024-09-25
2024-09-25
Lib_ID
Lib-240925B
Lib-240925B
Tecan_Location
Tecan
Tecan_date
Size_bp
284
286
Peak_Molarity
82.70
59.90
libSampleQC_DNA_Well
DNA_Library_set71/set1/G2.png
DNA_Library_set71/set1/H2.png
RIN
9.9
10.0
libSample_RNA_Well
RNA_Library_set71/set1/G2.png
RNA_Library_set71/set1/H2.png
SampleQC_method
TapeStation_2022
TapeStation_2022
SampleQC_date
2024-09-30
2024-09-30
Sample_ID
BG293LV06-11
BG293LV06-12
RBP
RBM22
RBM22
Batch_ID
BG293LV06
BG293LV06
WB_result
0.000
0.000
Library Description
TruSeq mRNA
TruSeq mRNA
Repeat_Library_Suffix
Lib_Status
SendToSequence
SendToSequence
Project
ENCORE2
ENCORE2
ID
4440
4441
Sequencing Information
BG293LV06-11
BG293LV06-12
Sample_ID
BG293LV06-11
BG293LV06-12
Sample Name
RBM22-BG293LV06-11
RBM22-BG293LV06-12
Pool ID
Pool-240930
Pool-240930
LocalServer_folder
set71
set71
total_reads
30,350,156
49,793,185
total_aligned_reads
27,632,917
44,515,048
unique_aligned_reads
25,651,929
41,612,504
percent_uniqueAligned
0.84520
0.83571
correlation_replicates
0.968496
0.968496
spikein_reads
76,540
162,344
percent_spikeins
0.00252
0.00326
original_ReadLength
101
101
QC_Status
ReadyToSubmit
ReadyToSubmit
ID
3009
3010
Data Submission Information
DCC submission information was not avaliable
File Information
Files of the experiment was not avaliable in the database
Back