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LUC7L
shRNA
in 293T
Batch: BG293LV06
Experiment Information
Sequencing Information
Data Submission
Files
Experiment Information
Western Blot
Experiment Status
Experiment Information (Status:
Sequenced
)
BG293LV06-103
BG293LV06-104
idx
0
0
TRCN#_or_BGC#
TRCN0000001197
TRCN0000001197
shRNA_or_gRNA_sequence
CCGGGAGGAAATCAGTGCGGAAGTTCTCGAGAACTTCCGCACTGATTTCCTCTTTTT
CCGGGAGGAAATCAGTGCGGAAGTTCTCGAGAACTTCCGCACTGATTTCCTCTTTTT
PAM
Name
LUC7L
LUC7L
Sample_ID
BG293LV06-103
BG293LV06-104
transduction_Date
9/5/24
9/5/24
days
D4
D4
RBP_name
LUC7L
LUC7L
qPCR_result
89.9
88.9
Ave_qPCR
89.4
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc
0
0
WB_result
Ave_WB
WB_DONE_date
MW
IP
antibody_Cat#
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM
0
0
Rep2_TPM
0
0
Action
Ready
Ready
Library_start_date
repeat_library
Note
ID
10190
10191
Western Blot
Western Blot info was not avaliable
Experiment Status
BG293LV06-103
BG293LV06-104
Sample_ID
BG293LV06-103
BG293LV06-104
Sample Name
Sample Name
LUC7L-BG293LV06-103B
LUC7L-BG293LV06-104B
RBP
LUC7L
LUC7L
Cell_Line
293T
293T
Exp UID
Status
Sequenced
Sequenced
Status_date
2024-10-16
2024-10-16
Project
ENCORE2
ENCORE2
Note
ID
13540
13541
Library-Prep
Sequencing
Library-Prep Information
BG293LV06-103
BG293LV06-104
Sample #
103
104
Sample Name
LUC7L-BG293LV06-103B
LUC7L-BG293LV06-104B
Sample_Name_Alias
Index Well Position
G06
H06
Index_table
IDT_UniqueDualIndex_96_V2
IDT_UniqueDualIndex_96_V2
LibPrep_date
2024-10-02
2024-10-02
Lib_ID
Lib-241002
Lib-241002
Tecan_Location
Tecan
Tecan_date
Size_bp
278
270
Peak_Molarity
79.60
76.40
libSampleQC_DNA_Well
DNA_Library_set72/set1/G6.png
DNA_Library_set72/set1/H6.png
RIN
9.9
10.0
libSample_RNA_Well
RNA_Library_set72/set1/G6.png
RNA_Library_set72/set1/H6.png
SampleQC_method
TapeStation_2022
TapeStation_2022
SampleQC_date
2024-10-04
2024-10-04
Sample_ID
BG293LV06-103
BG293LV06-104
RBP
LUC7L
LUC7L
Batch_ID
BG293LV06
BG293LV06
WB_result
0.000
0.000
Library Description
TruSeq mRNA
TruSeq mRNA
Repeat_Library_Suffix
B
B
Lib_Status
SendToSequence
SendToSequence
Project
ENCORE2
ENCORE2
ID
4528
4529
Sequencing Information
BG293LV06-103
BG293LV06-104
Sample_ID
BG293LV06-103
BG293LV06-104
Sample Name
LUC7L-BG293LV06-103B
LUC7L-BG293LV06-104B
Pool ID
Pool-241004
Pool-241004
LocalServer_folder
set72
set72
total_reads
31,906,029
29,301,075
total_aligned_reads
29,972,118
27,182,824
unique_aligned_reads
28,060,833
25,435,695
percent_uniqueAligned
0.87948
0.86808
correlation_replicates
0.995898
0.995898
spikein_reads
113,400
169,338
percent_spikeins
0.00355
0.00578
original_ReadLength
101
101
QC_Status
ReadyToSubmit
ReadyToSubmit
ID
3097
3098
Data Submission Information
DCC submission information was not avaliable
File Information
Files of the experiment was not avaliable in the database
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